Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 1.5e-52 210.3 121 100.0
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 7.0e-42 174.9 127 81.9
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 1.1e-39 167.5 103 88.3
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 1.5e-39 167.2 113 78.8
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 1.6e-38 163.7 103 85.4
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 8.0e-38 161.4 107 85.0
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 2.2e-35 153.3 114 76.3
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 4.8e-35 152.1 114 76.3
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 2.2e-32 143.3 102 76.5
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 2.2e-32 143.3 102 76.5
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 2.2e-32 143.3 102 76.5
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 7.2e-31 138.3 112 73.2
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 4.7e-30 135.6 100 76.0
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 4.7e-30 135.6 102 73.5
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 4.0e-29 132.5 102 75.5
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 3.4e-28 129.4 110 68.2
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 3.4e-28 129.4 94 72.3
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 3.7e-27 125.9 101 68.3
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 3.7e-27 125.9 110 66.4
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 8.3e-27 124.8 112 63.4
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 1.4e-26 124.0 110 64.5
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 1.8e-26 123.6 112 65.2
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 9.2e-26 121.3 102 64.7
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 1.2e-25 120.9 62 96.8
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 1.2e-25 120.9 62 96.8
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 1.2e-25 120.9 101 67.3
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 1.2e-25 120.9 112 62.5
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 1.2e-25 120.9 97 68.0
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 2.0e-25 120.2 97 69.1
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 2.7e-25 119.8 101 65.3
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 2.7e-25 119.8 112 62.5
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 2.7e-25 119.8 107 63.6
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 4.5e-25 119.0 109 60.6
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 5.9e-25 118.6 98 64.3
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 5.9e-25 118.6 106 66.0
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 7.8e-25 118.2 110 62.7
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.0e-24 117.9 97 66.0
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 1.3e-24 117.5 112 61.6
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 1.7e-24 117.1 107 58.9
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 2.3e-24 116.7 66 90.9
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 2.9e-24 116.3 70 87.1
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 5.0e-24 115.5 63 88.9
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 5.0e-24 115.5 62 90.3
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 5.0e-24 115.5 58 94.8
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 6.6e-24 115.2 100 65.0
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 8.6e-24 114.8 100 67.0
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 8.6e-24 114.8 95 66.3
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 8.6e-24 114.8 70 81.4
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 1.5e-23 114.0 100 65.0
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 1.5e-23 114.0 102 63.7
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 1.5e-23 114.0 63 88.9
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 1.9e-23 113.6 113 58.4
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 1.9e-23 113.6 106 61.3
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 2.5e-23 113.2 74 78.4
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 5.6e-23 112.1 70 78.6
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 9.5e-23 111.3 107 59.8
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 1.2e-22 110.9 106 62.3
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 1.2e-22 110.9 55 98.2
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 1.2e-22 110.9 95 63.2
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 1.6e-22 110.5 105 62.9
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 2.1e-22 110.2 63 85.7
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 2.1e-22 110.2 84 70.2
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 4.7e-22 109.0 63 82.5
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 8.0e-22 108.2 99 64.6
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 8.0e-22 108.2 70 78.6
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 8.0e-22 108.2 110 59.1
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 1.0e-21 107.8 109 61.5
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 1.4e-21 107.5 100 62.0
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 1.4e-21 107.5 64 84.4
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 5.2e-21 105.5 123 54.5
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 6.8e-21 105.1 56 91.1
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 6.8e-21 105.1 96 61.5
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 8.9e-21 104.8 53 92.5
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 8.9e-21 104.8 100 58.0
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 8.9e-21 104.8 63 81.0
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 8.9e-21 104.8 112 57.1
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 1.2e-20 104.4 59 83.1
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 2.6e-20 103.2 60 81.7
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 4.4e-20 102.4 63 77.8
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 4.4e-20 102.4 55 87.3
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 4.4e-20 102.4 98 58.2
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 7.5e-20 101.7 59 84.7
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 3.7e-19 99.4 101 57.4
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 3.7e-19 99.4 96 60.4
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 8.3e-19 98.2 100 55.0
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 1.8e-18 97.1 90 61.1
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 1.8e-18 97.1 100 57.0
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 1.2e-17 94.4 67 71.6
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.7e-17 93.2 83 62.7
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.5e-15 87.4 92 56.5
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 4.3e-15 85.9 63 66.7
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 7.3e-15 85.1 63 69.8
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 1.4e-13 80.9 115 47.0
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 2.3e-13 80.1 98 51.0
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 1.6e-09 67.4 59 57.6


User provided reference genes

Program Settings