Gene: AT5G57240

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G57240
  • Transcript Identifier AT5G57240.1
  • Gene Type Coding gene
  • Location Chr5 : 23193449-23195303 : positive

Gene Family Information

  • ID HOM05D003168
  • #Genes/#Species 216/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G57240.1
  • symbol ORP4C
  • uniprot Q9LVD4

Descriptions

  • Description OSBP(oxysterol binding protein)-related protein 4C
  • Computational description OSBP(oxysterol binding protein)-related protein 4C (ORP4C); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.1); Has 2168 Blast hits to 2165 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1089; Fungi - 634; Plants - 225; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015918
IEA
GOA Databasesterol transport
GO:0006869
IEA
GOA Databaselipid transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008289
IEA
Gene Ontologylipid binding
GO:0008289
IEA
InterProlipid binding
GO:0015248
IBA
Gene Ontologysterol transporter activity1
GO:0032934
IBA
Gene Ontologysterol binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005829
IBA
Gene Ontologycytosol1
GO:0043231
IBA
Gene Ontologyintracellular membrane-bounded organelle1
GO:0016020
IBA
Gene Ontologymembrane1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000648 Oxysterol-binding protein
IPR037239 Oxysterol-binding protein superfamily
Mapman id Description
35.1 not assigned.annotated