Gene: AT5G55120
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G55120
- Transcript Identifier AT5G55120.1
- Gene Type Coding gene
- Location Chr5 : 22369515-22371709 : positive
Gene Family Information
- ID HOM05D002089
- #Genes/#Species 319/99
- Phylogenetic origin
- ID ORTHO05D002848
- #Genes/#Species 258/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G55120.1
- symbol VTC5
- full_name VITAMIN C DEFECTIVE 5
- uniprot Q9FLP9
Descriptions
- Description GDP-L-galactose phosphorylase VITAMIN C DEFECTIVE 5 (VTC5)
- Computational description VITAMIN C DEFECTIVE 5 (VTC5); BEST Arabidopsis thaliana protein match is: mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase (GDP)s;galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT4G26850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity | |
| GO:0019853 | IEA | GOA Database | L-ascorbic acid biosynthetic process | |
| GO:0019853 | IMP | Gene Ontology | L-ascorbic acid biosynthetic process | 1 |
| GO:0006006 | IBA | Gene Ontology | glucose metabolic process | 2 |
| GO:0010193 | IEP | Gene Ontology | response to ozone | 3 |
| GO:0009753 | IEP | Gene Ontology | response to jasmonic acid | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080048 | IEA | GOA Database | GDP-D-glucose phosphorylase activity | |
| GO:0080048 | IDA IBA | Gene Ontology | GDP-D-glucose phosphorylase activity | 2 4 |
| GO:0080048 | IEA | InterPro | GDP-D-glucose phosphorylase activity | |
| GO:0005085 | IEA | GOA Database | guanyl-nucleotide exchange factor activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0080046 | IDA | Gene Ontology | quercetin 4'-O-glucosyltransferase activity | 4 |
| GO:0010475 | IDA | Gene Ontology | galactose-1-phosphate guanylyltransferase (GDP) activity | 1 |
| GO:0080047 | IEA | Gene Ontology | GDP-L-galactose phosphorylase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IBA | Gene Ontology | cytoplasm | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR026506 | GDP-L-galactose/GDP-D-glucose phosphorylase |
| Mapman id | Description |
|---|---|
| 10.5.6.1.5 | Redox homeostasis.ascorbate-based redox regulation.ascorbate metabolism.L-galactose biosynthesis pathway.GDP-L-galactose phosphorylase (VTC2/5) |