Gene: AT5G55000
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G55000
- Transcript Identifier AT5G55000.2
- Gene Type Coding gene
- Location Chr5 : 22318644-22321599 : positive
Gene Family Information
- ID HOM05D003950
- #Genes/#Species 177/89
- Phylogenetic origin
- ID ORTHO05D004697
- #Genes/#Species 173/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G55000.2
- symbol FIP2
- uniprot Q9SE95
Descriptions
- Description potassium channel tetramerization domain-containing protein / pentapeptide repeat-containing protein
- Computational description FIP2; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646), BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 27525 Blast hits to 9536 proteins in 1229 species: Archae - 302; Bacteria - 20004; Metazoa - 1613; Fungi - 16; Plants - 337; Viruses - 108; Other Eukaryotes - 5145 (source: NCBI BLink).
- Computational description FIP2; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646), BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G44920.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | Gene Ontology | protein ubiquitination | |
| GO:0051260 | IEA | Gene Ontology | protein homooligomerization | |
| GO:0051260 | IEA | InterPro | protein homooligomerization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0000325 | HDA | Gene Ontology | plant-type vacuole | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |