Gene: AT5G54950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G54950
  • Transcript Identifier AT5G54950.1
  • Gene Type Coding gene
  • Location Chr5 : 22309832-22310242 : negative

Gene Family Information

  • ID HOM05D000228
  • #Genes/#Species 1809/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G54950.1
  • uniprot Q9FFT5

Descriptions

  • Description Aconitase family protein
  • Computational description Aconitase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, leaf, stamen; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase-like core (InterPro:IPR015937); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006099
IBA
Gene Ontologytricarboxylic acid cycle1
GO:0006101
IBA
Gene Ontologycitrate metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051539
IBA
Gene Ontology4 iron, 4 sulfur cluster binding1
GO:0003994
IBA
Gene Ontologyaconitate hydratase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005739
IBA
Gene Ontologymitochondrion1
GO:0005829
IBA
Gene Ontologycytosol1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel
IPR006249 Aconitase/Iron-responsive element-binding protein 2
Mapman id Description
35.1 not assigned.annotated