Gene: AT5G54170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G54170
  • Transcript Identifier AT5G54170.1
  • Gene Type Coding gene
  • Location Chr5 : 21985056-21987039 : negative

Gene Family Information

  • ID HOM05D000989
  • #Genes/#Species 609/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G54170.1
  • uniprot F4JYV3

Descriptions

  • Description Polyketide cyclase/dehydrase and lipid transport superfamily protein
  • Computational description Polyketide cyclase/dehydrase and lipid transport superfamily protein; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT1G64720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009611
IEP
Gene Ontologyresponse to wounding1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008289
IEA
Gene Ontologylipid binding
GO:0008289
IEA
InterProlipid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002913 START domain
IPR023393 START-like domain superfamily
Mapman id Description
35.1 not assigned.annotated