Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000989', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '609', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p23230' => 'bna', 'A01p32010' => 'bna', 'A01p40460' => 'bna', 'A03p38020' => 'bna', 'A05p25600' => 'bna', 'A08p11150' => 'bna', 'A09p23590' => 'bna', 'A10p11490' => 'bna', 'Aa31LG10G220' => 'aar', 'Aa31LG2G1770' => 'aar', 'Aa31LG3G9840' => 'aar', 'Aa31LG8G9560' => 'aar', 'Aa31sc109G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3729' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.3861' => 'aag', 'Actinidia04477' => 'ach', 'Actinidia08696' => 'ach', 'Actinidia22220' => 'ach', 'Actinidia34267' => 'ach', 'Actinidia38817' => 'ach', 'Actinidia40085' => 'ach', 'Ah.04g154120' => 'amhyb', 'Ah.07g204670' => 'amhyb', 'Ah.08g217990' => 'amhyb', 'Ah.12g053360' => 'amhyb', 'AL1G64210' => 'aly', 'AL2G10030' => 'aly', 'AL3G24790' => 'aly', 'AL3G37520' => 'aly', 'AL7G41630' => 'aly', 'AL8G29390' => 'aly', 'Aqoxy2G03224' => 'aox', 'Aqoxy5G00318' => 'aox', 'Aqoxy5G04343' => 'aox', 'Aqoxy7G02659' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3J84P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5L1PLW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CW4TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94SB72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ECX43N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FCN3VB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JEY2CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZMQ1W' => 'arhy', 'AT1G55960' => 'ath', 'AT1G64720' => 'ath', 'AT3G13062' => 'ath', 'AT3G23080' => 'ath', 'AT4G14500' => 'ath', 'AT5G54170' => 'ath', 'ATR0582G068' => 'atr', 'ATR0619G001' => 'atr', 'ATR0626G329' => 'atr', 'ATR0665G242' => 'atr', 'ATR0849G002' => 'atr', 'ATR1155G007' => 'atr', 'Atru.chr12.2425' => 'acertr', 'Atru.chr3.4100' => 'acertr', 'Atru.chr3.4101' => 'acertr', 'Atru.chr3.4104' => 'acertr', 'Atru.chr4.2228' => 'acertr', 'Atru.chr9.1848' => 'acertr', 'AUR62001309' => 'cqu', 'AUR62006008' => 'cqu', 'AUR62007080' => 'cqu', 'AUR62019943' => 'cqu', 'AUR62025691' => 'cqu', 'AUR62035618' => 'cqu', 'AUR62040381' => 'cqu', 'AUR62041209' => 'cqu', 'BcaB01g04282' => 'bca', 'BcaB04g18227' => 'bca', 'BcaB04g20473' => 'bca', 'BcaB04g20474' => 'bca', 'BcaB04g20476' => 'bca', 'BcaB06g26432' => 'bca', 'BcaB06g26433' => 'bca', 'BcaB06g26437' => 'bca', 'BcaB07g30726' => 'bca', 'BcaB07g33179' => 'bca', 'BcaC01g04007' => 'bca', 'BcaC01g06289' => 'bca', 'BcaC01g06290' => 'bca', 'BcaC01g06292' => 'bca', 'BcaC04g21554' => 'bca', 'BcaC05g27976' => 'bca', 'BcaC07g37823' => 'bca', 'BcaC08g43665' => 'bca', 'BcaC09g49244' => 'bca', 'BcaC09g50112' => 'bca', 'BcaNung00365' => 'bca', 'BNapus_Darmor_BZH_scaffold_273p00040' => 'bna', 'BolC1t02815H' => 'bol', 'BolC1t04051H' => 'bol', 'BolC1t05148H' => 'bol', 'BolC3t16883H' => 'bol', 'BolC5t32727H' => 'bol', 'BolC6t36168H' => 'bol', 'BolC8t48210H' => 'bol', 'BolC9t55905H' => 'bol', 'BolC9t57319H' => 'bol', 'BraA01t02233Z' => 'bra', 'BraA01t03326Z' => 'bra', 'BraA03t12954Z' => 'bra', 'BraA05t21442Z' => 'bra', 'BraA08t33112Z' => 'bra', 'BraA09t37963Z' => 'bra', 'BraA10t43243Z' => 'bra', 'BraSC56t46391Z' => 'bra', 'C01p28870' => 'bna', 'C01p41010' => 'bna', 'C01p52040' => 'bna', 'C01p52050' => 'bna', 'C03p17270' => 'bna', 'C03p44490' => 'bna', 'C03p46110' => 'bna', 'C05p39820' => 'bna', 'C06p10850' => 'bna', 'C09p30420' => 'bna', 'C09p44470' => 'bna', 'CAN.G251.6' => 'can', 'CAN.G303.13' => 'can', 'CAN.G567.107' => 'can', 'CAN.G790.1' => 'can', 'CANSAT01G0659' => 'cansat', 'CANSAT21G1654' => 'cansat', 'CANSAT21G1726' => 'cansat', 'CANSAT78G0202' => 'cansat', 'CARHR045700' => 'chi', 'CARHR046180' => 'chi', 'CARHR087630' => 'chi', 'CARHR098990' => 'chi', 'CARHR220720' => 'chi', 'CARHR267380' => 'chi', 'Carub.0001s4457' => 'cru', 'Carub.0002s0001' => 'cru', 'Carub.0003s1239' => 'cru', 'Carub.0003s2325' => 'cru', 'Carub.0007s2772' => 'cru', 'Carub.0008s1448' => 'cru', 'Ca_09941_v3' => 'car', 'Ca_09957_v3' => 'car', 'Ca_16776_v3' => 'car', 'Ca_24426_v3' => 'car', 'CBR_g32388' => 'cbr', 'Cc02_g00850' => 'ccan', 'Cc03_g04870' => 'ccan', 'Cc04_g00090' => 'ccan', 'Cc04_g00100' => 'ccan', 'Cc08_g16990' => 'ccan', 'CDE01G0627' => 'cde', 'CDE02G1618' => 'cde', 'CDE04G1464' => 'cde', 'CDE05G1780' => 'cde', 'CDE05G3314' => 'cde', 'CDE06G0858' => 'cde', 'CDE06G2166' => 'cde', 'CDE07G1991' => 'cde', 'CDE09G0488' => 'cde', 'CDE12G0073' => 'cde', 'CDE12G0836' => 'cde', 'Cfa008378' => 'cfa', 'Cfa011896' => 'cfa', 'Cfa016163' => 'cfa', 'Cfa023514' => 'cfa', 'Ciclev10005003m.g' => 'ccl', 'Ciclev10020224m.g' => 'ccl', 'Ciclev10020581m.g' => 'ccl', 'Ciclev10028538m.g' => 'ccl', 'CiPaw.01G093100' => 'cil', 'CiPaw.02G116200' => 'cil', 'CiPaw.05G205000' => 'cil', 'CiPaw.11G109800' => 'cil', 'CiPaw.12G075800' => 'cil', 'ClCG01G001390' => 'cla', 'ClCG05G004590' => 'cla', 'ClCG05G012260' => 'cla', 'ClCG07G008250' => 'cla', 'COL.COLO4_10831' => 'col', 'COL.COLO4_14367' => 'col', 'COL.COLO4_15793' => 'col', 'COL.COLO4_19515' => 'col', 'COL.COLO4_22565' => 'col', 'COL.COLO4_36692' => 'col', 'Cpa.g.sc10.6' => 'cpa', 'Cpa.g.sc3.156' => 'cpa', 'Cpa.g.sc37.100' => 'cpa', 'Cpa.g.sc58.49' => 'cpa', 'Cre01.g048701' => 'cre', 'Cre03.g174850' => 'cre', 'Cre03.g198050' => 'cre', 'CsaV3_3G012570' => 'csa', 'CsaV3_3G020170' => 'csa', 'CsaV3_4G005850' => 'csa', 'CsaV3_5G001520' => 'csa', 'CSS0006754' => 'camsi', 'CSS0013054' => 'camsi', 'CSS0018458' => 'camsi', 'CSS0020273' => 'camsi', 'CSS0021808' => 'camsi', 'CSS0029916' => 'camsi', 'CSS0031702' => 'camsi', 'CSS0035105' => 'camsi', 'CSS0036335' => 'camsi', 'CSS0045851' => 'camsi', 'CSS0050465' => 'camsi', 'DCAR_002350' => 'dca', 'DCAR_005499' => 'dca', 'DCAR_006566' => 'dca', 'DCAR_007675' => 'dca', 'DCAR_007676' => 'dca', 'DCAR_014563' => 'dca', 'DCAR_020370' => 'dca', 'DCAR_027278' => 'dca', 'Dinv12897' => 'din', 'Dinv18761' => 'din', 'Dinv20318' => 'din', 'Dinv29213' => 'din', 'Dinv29909' => 'din', 'Duzib052G0107' => 'dzi', 'Duzib068G0096' => 'dzi', 'Duzib068G1164' => 'dzi', 'Duzib084G1146' => 'dzi', 'Duzib192G0753' => 'dzi', 'Duzib205G0357' => 'dzi', 'Duzib212G0433' => 'dzi', 'Duzib235G1336' => 'dzi', 'ECA232G1648' => 'eca', 'ECA232G4302' => 'eca', 'ECA233G2065' => 'eca', 'ECA240G0410' => 'eca', 'ECA240G0748' => 'eca', 'EL10Ac2g04208' => 'bvu', 'EL10Ac3g05183' => 'bvu', 'EL10Ac5g12398' => 'bvu', 'EL10Ac7g18115' => 'bvu', 'EL10As18g24158' => 'bvu', 'Eucgr.D01658' => 'egr', 'Eucgr.E01072' => 'egr', 'Eucgr.F04053' => 'egr', 'Eucgr.H03157' => 'egr', 'Eucgr.J01696' => 'egr', 'Eucgr.K00428' => 'egr', 'FAN01G2256' => 'fan', 'FAN02G1918' => 'fan', 'FAN02G4168' => 'fan', 'FAN03G0537' => 'fan', 'FAN04G2039' => 'fan', 'FAN05G4662' => 'fan', 'FAN08G0172' => 'fan', 'FAN09G3581' => 'fan', 'FAN10G0985' => 'fan', 'FAN10G2232' => 'fan', 'FAN12G0922' => 'fan', 'FAN12G1302' => 'fan', 'FAN13G2159' => 'fan', 'FAN14G2118' => 'fan', 'FAN17G2115' => 'fan', 'FAN18G2710' => 'fan', 'FAN22G1634' => 'fan', 'FvH4_4g02700' => 'fve', 'FvH4_4g22000' => 'fve', 'FvH4_5g10520' => 'fve', 'FvH4_6g36480' => 'fve', 'FvH4_7g32880' => 'fve', 'Glyma.01G234700' => 'gma', 'Glyma.04G228700' => 'gma', 'Glyma.06G136200' => 'gma', 'Glyma.07G001000' => 'gma', 'Glyma.08G226000' => 'gma', 'Glyma.10G172100' => 'gma', 'Glyma.11G008200' => 'gma', 'Glyma.20G218200' => 'gma', 'Gohir.A01G024200' => 'ghi', 'Gohir.A03G088600' => 'ghi', 'Gohir.A05G116032' => 'ghi', 'Gohir.A09G057500' => 'ghi', 'Gohir.A09G187700' => 'ghi', 'Gohir.A11G017900' => 'ghi', 'Gohir.A12G246500' => 'ghi', 'Gohir.D01G022200' => 'ghi', 'Gohir.D02G105300' => 'ghi', 'Gohir.D05G116600' => 'ghi', 'Gohir.D09G056700' => 'ghi', 'Gohir.D09G182500' => 'ghi', 'Gohir.D11G017700' => 'ghi', 'Gohir.D12G247200' => 'ghi', 'Gorai.002G024700' => 'gra', 'Gorai.005G119500' => 'gra', 'Gorai.006G070300' => 'gra', 'Gorai.006G204800' => 'gra', 'Gorai.007G018700' => 'gra', 'Gorai.008G265200' => 'gra', 'Gorai.009G120600' => 'gra', 'GSVIVG01018120001' => 'vvi', 'GSVIVG01019684001' => 'vvi', 'GSVIVG01029461001' => 'vvi', 'HanXRQChr02g0047081' => 'han', 'HanXRQChr03g0085311' => 'han', 'HanXRQChr03g0092371' => 'han', 'HanXRQChr09g0250711' => 'han', 'HanXRQChr09g0277441' => 'han', 'HanXRQChr13g0415641' => 'han', 'HanXRQChr13g0415651' => 'han', 'HanXRQChr13g0415661' => 'han', 'HanXRQChr13g0424481' => 'han', 'Haze_00294' => 'cav', 'Haze_09203' => 'cav', 'Haze_11301' => 'cav', 'Haze_11303' => 'cav', 'Haze_16237' => 'cav', 'Haze_16238' => 'cav', 'Hma1.2p1_0141F.1_g064000' => 'hma', 'Hma1.2p1_0198F.1_g085250' => 'hma', 'Hma1.2p1_0650F.1_g195430' => 'hma', 'Hma1.2p1_1193F.1_g265690' => 'hma', 'Hma1.2p1_1276F.1_g272200' => 'hma', 'HPP92_003522' => 'vpl', 'HPP92_015881' => 'vpl', 'HPP92_018325' => 'vpl', 'HPP92_020929' => 'vpl', 'HPP92_020972' => 'vpl', 'HPP92_020973' => 'vpl', 'Hund05662' => 'sun', 'Hund09711' => 'sun', 'Hund21056' => 'sun', 'Hund24920' => 'sun', 'Lalb_Chr05g0211171' => 'lal', 'Lalb_Chr06g0168581' => 'lal', 'Lalb_Chr08g0239671' => 'lal', 'Lalb_Chr09g0320041' => 'lal', 'Lalb_Chr11g0067391' => 'lal', 'Lalb_Chr21g0311511' => 'lal', 'Lalb_Chr23g0271921' => 'lal', 'Lj1g0023310' => 'lja', 'Lj2A153T86' => 'lonja', 'Lj2A153T87' => 'lonja', 'Lj3C896T1' => 'lonja', 'Lj3g0006607' => 'lja', 'Lj5A20T31' => 'lonja', 'Lj5A20T32' => 'lonja', 'Lj5g0015545' => 'lja', 'Lj6A657G46' => 'lonja', 'LjContig00222g0016598' => 'lja', 'Lsat_1_v5_gn_3_123001' => 'lsa', 'Lsat_1_v5_gn_4_106160' => 'lsa', 'Lsat_1_v5_gn_6_81481' => 'lsa', 'Lsat_1_v5_gn_8_4420' => 'lsa', 'Lsat_1_v5_gn_9_50060' => 'lsa', 'Manes.01G043000' => 'mes', 'Manes.01G054900' => 'mes', 'Manes.02G000900' => 'mes', 'Manes.03G168700' => 'mes', 'Manes.14G000100' => 'mes', 'Mapoly0020s0077' => 'mpo', 'Mapoly0154s0024' => 'mpo', 'MBI04_g22064_MAGBIO' => 'mbi', 'MBI07_g11058_MAGBIO' => 'mbi', 'MBI11_g20199_MAGBIO' => 'mbi', 'MBI11_g20200_MAGBIO' => 'mbi', 'MBI11_g20621_MAGBIO' => 'mbi', 'MBI11_g25037_MAGBIO' => 'mbi', 'MBI12_g11797_MAGBIO' => 'mbi', 'MBI15_g24506_MAGBIO' => 'mbi', 'MBI16_g00831_MAGBIO' => 'mbi', 'MCO04G365' => 'mco', 'MCO12G174' => 'mco', 'MD00G1034500' => 'mdo', 'MD06G1122300' => 'mdo', 'MD07G1298700' => 'mdo', 'MD09G1168600' => 'mdo', 'MD10G1168000' => 'mdo', 'MD13G1135100' => 'mdo', 'MD13G1207400' => 'mdo', 'MD16G1209000' => 'mdo', 'MD17G1158100' => 'mdo', 'Medtr1g078030' => 'mtr', 'Medtr3g092640' => 'mtr', 'Medtr4g005140' => 'mtr', 'Medtr5g007030' => 'mtr', 'MELO3C005798.2' => 'cme', 'MELO3C006468.2' => 'cme', 'MELO3C016366.2' => 'cme', 'MELO3C023731.2' => 'cme', 'Migut.A01071' => 'egut', 'Migut.E00722' => 'egut', 'Migut.F00991' => 'egut', 'Migut.I01212' => 'egut', 'Migut.N00240' => 'egut', 'MSTRG.11572' => 'ama', 'MSTRG.12217' => 'ama', 'MSTRG.13699' => 'ama', 'MSTRG.24701' => 'ama', 'MSTRG.24875' => 'ama', 'MSTRG.8546' => 'ama', 'Nitab4.5_0000319g0060' => 'nta', 'Nitab4.5_0000499g0090' => 'nta', 'Nitab4.5_0001418g0090' => 'nta', 'Nitab4.5_0001418g0100' => 'nta', 'Nitab4.5_0001863g0020' => 'nta', 'Nitab4.5_0002158g0190' => 'nta', 'Nitab4.5_0002520g0070' => 'nta', 'Nitab4.5_0003419g0040' => 'nta', 'Nitab4.5_0004098g0010' => 'nta', 'Nitab4.5_0005036g0010' => 'nta', 'Nitab4.5_0005040g0010' => 'nta', 'Nitab4.5_0007409g0010' => 'nta', 'Nitab4.5_0012794g0010' => 'nta', 'Nn1g00440' => 'nnu', 'Nn1g02439' => 'nnu', 'Nn1g02613' => 'nnu', 'Nn3g18800' => 'nnu', 'Nn3g19541' => 'nnu', 'Nn5g26976' => 'nnu', 'Nn8g41214' => 'nnu', 'Oeu008794.2' => 'oeu', 'Oeu015755.1' => 'oeu', 'Oeu021653.1' => 'oeu', 'Oeu035083.1' => 'oeu', 'Oeu035084.1' => 'oeu', 'Oeu042859.1' => 'oeu', 'Oeu061028.1' => 'oeu', 'Os02g0468400' => 'osa', 'Os07g0185200' => 'osa', 'Peaxi162Scf00074g00017' => 'pax', 'Peaxi162Scf00300g00827' => 'pax', 'Peaxi162Scf00325g00099' => 'pax', 'Peaxi162Scf00542g00059' => 'pax', 'Peaxi162Scf00684g00414' => 'pax', 'PGR004G2641' => 'pgr', 'PGR031G3030' => 'pgr', 'PGR042G2611' => 'pgr', 'PGR102G0324' => 'pgr', 'PGR119G2414' => 'pgr', 'PGR142G3502' => 'pgr', 'PGSC0003DMG400003208' => 'stu', 'PGSC0003DMG400009197' => 'stu', 'PGSC0003DMG400009678' => 'stu', 'PGSC0003DMG400012110' => 'stu', 'PGSC0003DMG400016320' => 'stu', 'Phvul.002G042100' => 'pvu', 'Phvul.007G117200' => 'pvu', 'Phvul.009G045400' => 'pvu', 'Phvul.010G165300' => 'pvu', 'Potri.001G450100' => 'ptr', 'Potri.007G002700' => 'ptr', 'Potri.008G162600' => 'ptr', 'Potri.010G076500' => 'ptr', 'Potri.011G151500' => 'ptr', 'Potri.012G021400' => 'ptr', 'Potri.014G001100' => 'ptr', 'Potri.015G005000' => 'ptr', 'Pp3c15_18140' => 'ppa', 'Pp3c23_14010' => 'ppa', 'Pp3c9_22010' => 'ppa', 'PRCOL_00006985' => 'pco', 'Prupe.1G030900' => 'ppe', 'Prupe.1G210200' => 'ppe', 'Prupe.2G318500' => 'ppe', 'Prupe.3G027000' => 'ppe', 'Prupe.5G133300' => 'ppe', 'Psat2g189760' => 'psa', 'Psat5g072080' => 'psa', 'Psat6g052760' => 'psa', 'PSO063G0667' => 'pso', 'PSO063G2540' => 'pso', 'PSO170G5971' => 'pso', 'PSO210G3556' => 'pso', 'PSO384G0433' => 'pso', 'PSO782G4281' => 'pso', 'PSO832G1573' => 'pso', 'QL02p027280' => 'qlo', 'QL05p085514' => 'qlo', 'QL06p015767' => 'qlo', 'QL09p007219' => 'qlo', 'QL93p0113_0031' => 'qlo', 'RcHm_v2.0_Chr1g0356291' => 'rch', 'RcHm_v2.0_Chr1g0356301' => 'rch', 'RcHm_v2.0_Chr1g0382831' => 'rch', 'RcHm_v2.0_Chr2g0148611' => 'rch', 'RcHm_v2.0_Chr4g0390521' => 'rch', 'RcHm_v2.0_Chr4g0428201' => 'rch', 'RcHm_v2.0_Chr7g0187601' => 'rch', 'Rhsim02G0033100' => 'rsi', 'Rhsim02G0253900' => 'rsi', 'Rhsim03G0215200' => 'rsi', 'Rhsim04G0190200' => 'rsi', 'Rhsim08G0251900' => 'rsi', 'Sabra05G0139700' => 'sbr', 'Sabra07G0002000' => 'sbr', 'Sabra08G0124000' => 'sbr', 'Sabra10G0032200' => 'sbr', 'Sabra11G0136000' => 'sbr', 'Sabra11G0149100' => 'sbr', 'Sabra12G0012200' => 'sbr', 'Sabra14G0002700' => 'sbr', 'Sabra14G0003500' => 'sbr', 'Sabra15G0003500' => 'sbr', 'Sabra16G0304000' => 'sbr', 'SalBow2G2614' => 'sbo', 'SalBow3G4624' => 'sbo', 'SalBow6G4719' => 'sbo', 'Sc01g0010860' => 'sci', 'Sc13g0005050' => 'sci', 'Sc13g0006000' => 'sci', 'Sc15g0001170' => 'sci', 'Sc19g0000600' => 'sci', 'Sc19g0003780' => 'sci', 'Sed0002503' => 'sed', 'Sed0004019' => 'sed', 'Sed0017163' => 'sed', 'Sed0019938' => 'sed', 'Sed0020073' => 'sed', 'Sed0021271' => 'sed', 'SEGI_06290' => 'sgi', 'SEGI_11231' => 'sgi', 'SEGI_11875' => 'sgi', 'SEGI_20704' => 'sgi', 'SEGI_22459' => 'sgi', 'SGA_v2.0_scaffold104G30185' => 'sas', 'SGA_v2.0_scaffold104G30227' => 'sas', 'SGA_v2.0_scaffold122G33258' => 'sas', 'SGA_v2.0_scaffold165G38191' => 'sas', 'SGA_v2.0_scaffold308G48106' => 'sas', 'SGA_v2.0_scaffold36G14260' => 'sas', 'SGA_v2.0_scaffold36G14262' => 'sas', 'SGA_v2.0_scaffold71G24021' => 'sas', 'SHI00597' => 'shi', 'SMO141G0087' => 'smo', 'SMO364G0840' => 'smo', 'Solyc03g081320.3' => 'sly', 'Solyc03g124060.3' => 'sly', 'Solyc06g053790.3' => 'sly', 'Solyc08g083330.2' => 'sly', 'Sopen03g022040' => 'spe', 'Sopen03g041790' => 'spe', 'Sopen06g018910' => 'spe', 'Sopen08g031540' => 'spe', 'Sp1g41570' => 'spa', 'Sp2g00010' => 'spa', 'Sp3g11220' => 'spa', 'Sp3g20760' => 'spa', 'Sp6g16230' => 'spa', 'Sp7g12580' => 'spa', 'TAR362G0659' => 'tar', 'TAR365G0534' => 'tar', 'TAR374G1276' => 'tar', 'TAR375G0446' => 'tar', 'TAR383G0471' => 'tar', 'TAR626G0132' => 'tar', 'TAR626G0219' => 'tar', 'TAR626G0755' => 'tar', 'TAR626G0832' => 'tar', 'TAR629G2596' => 'tar', 'TAR636G0772' => 'tar', 'TAR636G1136' => 'tar', 'TAR718G0001' => 'tar', 'TAR718G0006' => 'tar', 'THA.LOC104804742' => 'tha', 'THA.LOC104804749' => 'tha', 'THA.LOC104808596' => 'tha', 'THA.LOC104815704' => 'tha', 'THA.LOC104817383' => 'tha', 'THA.LOC104822743' => 'tha', 'THA.LOC104823628' => 'tha', 'Thecc.03G208300' => 'tca', 'Thecc.03G217400' => 'tca', 'Thecc.04G246300' => 'tca', 'Thecc.06G052000' => 'tca', 'Thhalv10011546m.g' => 'esa', 'Thhalv10013518m.g' => 'esa', 'Thhalv10020751m.g' => 'esa', 'Thhalv10020844m.g' => 'esa', 'Thhalv10023504m.g' => 'esa', 'Thhalv10025252m.g' => 'esa', 'TPR.G33645' => 'tpr', 'TPR.G38035' => 'tpr', 'TPR.G38747' => 'tpr', 'TPR.G39886' => 'tpr', 'TWI09G0018' => 'twi', 'TWI12G0396' => 'twi', 'TWI15G0513' => 'twi', 'TWI60G1484' => 'twi', 'TWI73G1262' => 'twi', 'TWI81G0771' => 'twi', 'unitig_21.g20904' => 'ugi', 'unitig_22.g5632' => 'ugi', 'unitig_32.g10830' => 'ugi', 'unitig_578.g16676' => 'ugi', 'unitig_8.g3582' => 'ugi', 'vmacro06439' => 'vma', 'vmacro08413' => 'vma', 'vmacro08414' => 'vma', 'vmacro11485' => 'vma', 'vmacro15408' => 'vma', 'vmacro18725' => 'vma', 'vmacro22781' => 'vma', 'VMungo0251G1891' => 'vmu', 'VMungo0331G0118' => 'vmu', 'VMungo0720G2423' => 'vmu', 'VMungo1215G3141' => 'vmu', 'VMungo1309G0109' => 'vmu', 'Zm00001eb074680' => 'zma', 'Zm00001eb082000' => 'zma', 'Zm00001eb089010' => 'zma', 'Zm00001eb208580' => 'zma', 'Zm00001eb230750' => 'zma', 'Zm00001eb240920' => 'zma', 'Zm00001eb419490' => 'zma', 'Zm00001eb429740' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000989', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000989' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000989', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '609', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000989' ) ), 'genes' => array( 'A01p23230' => 'bna', 'A01p32010' => 'bna', 'A01p40460' => 'bna', 'A03p38020' => 'bna', 'A05p25600' => 'bna', 'A08p11150' => 'bna', 'A09p23590' => 'bna', 'A10p11490' => 'bna', 'Aa31LG10G220' => 'aar', 'Aa31LG2G1770' => 'aar', 'Aa31LG3G9840' => 'aar', 'Aa31LG8G9560' => 'aar', 'Aa31sc109G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3729' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.3861' => 'aag', 'Actinidia04477' => 'ach', 'Actinidia08696' => 'ach', 'Actinidia22220' => 'ach', 'Actinidia34267' => 'ach', 'Actinidia38817' => 'ach', 'Actinidia40085' => 'ach', 'Ah.04g154120' => 'amhyb', 'Ah.07g204670' => 'amhyb', 'Ah.08g217990' => 'amhyb', 'Ah.12g053360' => 'amhyb', 'AL1G64210' => 'aly', 'AL2G10030' => 'aly', 'AL3G24790' => 'aly', 'AL3G37520' => 'aly', 'AL7G41630' => 'aly', 'AL8G29390' => 'aly', 'Aqoxy2G03224' => 'aox', 'Aqoxy5G00318' => 'aox', 'Aqoxy5G04343' => 'aox', 'Aqoxy7G02659' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3J84P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5L1PLW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CW4TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94SB72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ECX43N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FCN3VB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JEY2CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZMQ1W' => 'arhy', 'AT1G55960' => 'ath', 'AT1G64720' => 'ath', 'AT3G13062' => 'ath', 'AT3G23080' => 'ath', 'AT4G14500' => 'ath', 'AT5G54170' => 'ath', 'ATR0582G068' => 'atr', 'ATR0619G001' => 'atr', 'ATR0626G329' => 'atr', 'ATR0665G242' => 'atr', 'ATR0849G002' => 'atr', 'ATR1155G007' => 'atr', 'Atru.chr12.2425' => 'acertr', 'Atru.chr3.4100' => 'acertr', 'Atru.chr3.4101' => 'acertr', 'Atru.chr3.4104' => 'acertr', 'Atru.chr4.2228' => 'acertr', 'Atru.chr9.1848' => 'acertr', 'AUR62001309' => 'cqu', 'AUR62006008' => 'cqu', 'AUR62007080' => 'cqu', 'AUR62019943' => 'cqu', 'AUR62025691' => 'cqu', 'AUR62035618' => 'cqu', 'AUR62040381' => 'cqu', 'AUR62041209' => 'cqu', 'BcaB01g04282' => 'bca', 'BcaB04g18227' => 'bca', 'BcaB04g20473' => 'bca', 'BcaB04g20474' => 'bca', 'BcaB04g20476' => 'bca', 'BcaB06g26432' => 'bca', 'BcaB06g26433' => 'bca', 'BcaB06g26437' => 'bca', 'BcaB07g30726' => 'bca', 'BcaB07g33179' => 'bca', 'BcaC01g04007' => 'bca', 'BcaC01g06289' => 'bca', 'BcaC01g06290' => 'bca', 'BcaC01g06292' => 'bca', 'BcaC04g21554' => 'bca', 'BcaC05g27976' => 'bca', 'BcaC07g37823' => 'bca', 'BcaC08g43665' => 'bca', 'BcaC09g49244' => 'bca', 'BcaC09g50112' => 'bca', 'BcaNung00365' => 'bca', 'BNapus_Darmor_BZH_scaffold_273p00040' => 'bna', 'BolC1t02815H' => 'bol', 'BolC1t04051H' => 'bol', 'BolC1t05148H' => 'bol', 'BolC3t16883H' => 'bol', 'BolC5t32727H' => 'bol', 'BolC6t36168H' => 'bol', 'BolC8t48210H' => 'bol', 'BolC9t55905H' => 'bol', 'BolC9t57319H' => 'bol', 'BraA01t02233Z' => 'bra', 'BraA01t03326Z' => 'bra', 'BraA03t12954Z' => 'bra', 'BraA05t21442Z' => 'bra', 'BraA08t33112Z' => 'bra', 'BraA09t37963Z' => 'bra', 'BraA10t43243Z' => 'bra', 'BraSC56t46391Z' => 'bra', 'C01p28870' => 'bna', 'C01p41010' => 'bna', 'C01p52040' => 'bna', 'C01p52050' => 'bna', 'C03p17270' => 'bna', 'C03p44490' => 'bna', 'C03p46110' => 'bna', 'C05p39820' => 'bna', 'C06p10850' => 'bna', 'C09p30420' => 'bna', 'C09p44470' => 'bna', 'CAN.G251.6' => 'can', 'CAN.G303.13' => 'can', 'CAN.G567.107' => 'can', 'CAN.G790.1' => 'can', 'CANSAT01G0659' => 'cansat', 'CANSAT21G1654' => 'cansat', 'CANSAT21G1726' => 'cansat', 'CANSAT78G0202' => 'cansat', 'CARHR045700' => 'chi', 'CARHR046180' => 'chi', 'CARHR087630' => 'chi', 'CARHR098990' => 'chi', 'CARHR220720' => 'chi', 'CARHR267380' => 'chi', 'Carub.0001s4457' => 'cru', 'Carub.0002s0001' => 'cru', 'Carub.0003s1239' => 'cru', 'Carub.0003s2325' => 'cru', 'Carub.0007s2772' => 'cru', 'Carub.0008s1448' => 'cru', 'Ca_09941_v3' => 'car', 'Ca_09957_v3' => 'car', 'Ca_16776_v3' => 'car', 'Ca_24426_v3' => 'car', 'CBR_g32388' => 'cbr', 'Cc02_g00850' => 'ccan', 'Cc03_g04870' => 'ccan', 'Cc04_g00090' => 'ccan', 'Cc04_g00100' => 'ccan', 'Cc08_g16990' => 'ccan', 'CDE01G0627' => 'cde', 'CDE02G1618' => 'cde', 'CDE04G1464' => 'cde', 'CDE05G1780' => 'cde', 'CDE05G3314' => 'cde', 'CDE06G0858' => 'cde', 'CDE06G2166' => 'cde', 'CDE07G1991' => 'cde', 'CDE09G0488' => 'cde', 'CDE12G0073' => 'cde', 'CDE12G0836' => 'cde', 'Cfa008378' => 'cfa', 'Cfa011896' => 'cfa', 'Cfa016163' => 'cfa', 'Cfa023514' => 'cfa', 'Ciclev10005003m.g' => 'ccl', 'Ciclev10020224m.g' => 'ccl', 'Ciclev10020581m.g' => 'ccl', 'Ciclev10028538m.g' => 'ccl', 'CiPaw.01G093100' => 'cil', 'CiPaw.02G116200' => 'cil', 'CiPaw.05G205000' => 'cil', 'CiPaw.11G109800' => 'cil', 'CiPaw.12G075800' => 'cil', 'ClCG01G001390' => 'cla', 'ClCG05G004590' => 'cla', 'ClCG05G012260' => 'cla', 'ClCG07G008250' => 'cla', 'COL.COLO4_10831' => 'col', 'COL.COLO4_14367' => 'col', 'COL.COLO4_15793' => 'col', 'COL.COLO4_19515' => 'col', 'COL.COLO4_22565' => 'col', 'COL.COLO4_36692' => 'col', 'Cpa.g.sc10.6' => 'cpa', 'Cpa.g.sc3.156' => 'cpa', 'Cpa.g.sc37.100' => 'cpa', 'Cpa.g.sc58.49' => 'cpa', 'Cre01.g048701' => 'cre', 'Cre03.g174850' => 'cre', 'Cre03.g198050' => 'cre', 'CsaV3_3G012570' => 'csa', 'CsaV3_3G020170' => 'csa', 'CsaV3_4G005850' => 'csa', 'CsaV3_5G001520' => 'csa', 'CSS0006754' => 'camsi', 'CSS0013054' => 'camsi', 'CSS0018458' => 'camsi', 'CSS0020273' => 'camsi', 'CSS0021808' => 'camsi', 'CSS0029916' => 'camsi', 'CSS0031702' => 'camsi', 'CSS0035105' => 'camsi', 'CSS0036335' => 'camsi', 'CSS0045851' => 'camsi', 'CSS0050465' => 'camsi', 'DCAR_002350' => 'dca', 'DCAR_005499' => 'dca', 'DCAR_006566' => 'dca', 'DCAR_007675' => 'dca', 'DCAR_007676' => 'dca', 'DCAR_014563' => 'dca', 'DCAR_020370' => 'dca', 'DCAR_027278' => 'dca', 'Dinv12897' => 'din', 'Dinv18761' => 'din', 'Dinv20318' => 'din', 'Dinv29213' => 'din', 'Dinv29909' => 'din', 'Duzib052G0107' => 'dzi', 'Duzib068G0096' => 'dzi', 'Duzib068G1164' => 'dzi', 'Duzib084G1146' => 'dzi', 'Duzib192G0753' => 'dzi', 'Duzib205G0357' => 'dzi', 'Duzib212G0433' => 'dzi', 'Duzib235G1336' => 'dzi', 'ECA232G1648' => 'eca', 'ECA232G4302' => 'eca', 'ECA233G2065' => 'eca', 'ECA240G0410' => 'eca', 'ECA240G0748' => 'eca', 'EL10Ac2g04208' => 'bvu', 'EL10Ac3g05183' => 'bvu', 'EL10Ac5g12398' => 'bvu', 'EL10Ac7g18115' => 'bvu', 'EL10As18g24158' => 'bvu', 'Eucgr.D01658' => 'egr', 'Eucgr.E01072' => 'egr', 'Eucgr.F04053' => 'egr', 'Eucgr.H03157' => 'egr', 'Eucgr.J01696' => 'egr', 'Eucgr.K00428' => 'egr', 'FAN01G2256' => 'fan', 'FAN02G1918' => 'fan', 'FAN02G4168' => 'fan', 'FAN03G0537' => 'fan', 'FAN04G2039' => 'fan', 'FAN05G4662' => 'fan', 'FAN08G0172' => 'fan', 'FAN09G3581' => 'fan', 'FAN10G0985' => 'fan', 'FAN10G2232' => 'fan', 'FAN12G0922' => 'fan', 'FAN12G1302' => 'fan', 'FAN13G2159' => 'fan', 'FAN14G2118' => 'fan', 'FAN17G2115' => 'fan', 'FAN18G2710' => 'fan', 'FAN22G1634' => 'fan', 'FvH4_4g02700' => 'fve', 'FvH4_4g22000' => 'fve', 'FvH4_5g10520' => 'fve', 'FvH4_6g36480' => 'fve', 'FvH4_7g32880' => 'fve', 'Glyma.01G234700' => 'gma', 'Glyma.04G228700' => 'gma', 'Glyma.06G136200' => 'gma', 'Glyma.07G001000' => 'gma', 'Glyma.08G226000' => 'gma', 'Glyma.10G172100' => 'gma', 'Glyma.11G008200' => 'gma', 'Glyma.20G218200' => 'gma', 'Gohir.A01G024200' => 'ghi', 'Gohir.A03G088600' => 'ghi', 'Gohir.A05G116032' => 'ghi', 'Gohir.A09G057500' => 'ghi', 'Gohir.A09G187700' => 'ghi', 'Gohir.A11G017900' => 'ghi', 'Gohir.A12G246500' => 'ghi', 'Gohir.D01G022200' => 'ghi', 'Gohir.D02G105300' => 'ghi', 'Gohir.D05G116600' => 'ghi', 'Gohir.D09G056700' => 'ghi', 'Gohir.D09G182500' => 'ghi', 'Gohir.D11G017700' => 'ghi', 'Gohir.D12G247200' => 'ghi', 'Gorai.002G024700' => 'gra', 'Gorai.005G119500' => 'gra', 'Gorai.006G070300' => 'gra', 'Gorai.006G204800' => 'gra', 'Gorai.007G018700' => 'gra', 'Gorai.008G265200' => 'gra', 'Gorai.009G120600' => 'gra', 'GSVIVG01018120001' => 'vvi', 'GSVIVG01019684001' => 'vvi', 'GSVIVG01029461001' => 'vvi', 'HanXRQChr02g0047081' => 'han', 'HanXRQChr03g0085311' => 'han', 'HanXRQChr03g0092371' => 'han', 'HanXRQChr09g0250711' => 'han', 'HanXRQChr09g0277441' => 'han', 'HanXRQChr13g0415641' => 'han', 'HanXRQChr13g0415651' => 'han', 'HanXRQChr13g0415661' => 'han', 'HanXRQChr13g0424481' => 'han', 'Haze_00294' => 'cav', 'Haze_09203' => 'cav', 'Haze_11301' => 'cav', 'Haze_11303' => 'cav', 'Haze_16237' => 'cav', 'Haze_16238' => 'cav', 'Hma1.2p1_0141F.1_g064000' => 'hma', 'Hma1.2p1_0198F.1_g085250' => 'hma', 'Hma1.2p1_0650F.1_g195430' => 'hma', 'Hma1.2p1_1193F.1_g265690' => 'hma', 'Hma1.2p1_1276F.1_g272200' => 'hma', 'HPP92_003522' => 'vpl', 'HPP92_015881' => 'vpl', 'HPP92_018325' => 'vpl', 'HPP92_020929' => 'vpl', 'HPP92_020972' => 'vpl', 'HPP92_020973' => 'vpl', 'Hund05662' => 'sun', 'Hund09711' => 'sun', 'Hund21056' => 'sun', 'Hund24920' => 'sun', 'Lalb_Chr05g0211171' => 'lal', 'Lalb_Chr06g0168581' => 'lal', 'Lalb_Chr08g0239671' => 'lal', 'Lalb_Chr09g0320041' => 'lal', 'Lalb_Chr11g0067391' => 'lal', 'Lalb_Chr21g0311511' => 'lal', 'Lalb_Chr23g0271921' => 'lal', 'Lj1g0023310' => 'lja', 'Lj2A153T86' => 'lonja', 'Lj2A153T87' => 'lonja', 'Lj3C896T1' => 'lonja', 'Lj3g0006607' => 'lja', 'Lj5A20T31' => 'lonja', 'Lj5A20T32' => 'lonja', 'Lj5g0015545' => 'lja', 'Lj6A657G46' => 'lonja', 'LjContig00222g0016598' => 'lja', 'Lsat_1_v5_gn_3_123001' => 'lsa', 'Lsat_1_v5_gn_4_106160' => 'lsa', 'Lsat_1_v5_gn_6_81481' => 'lsa', 'Lsat_1_v5_gn_8_4420' => 'lsa', 'Lsat_1_v5_gn_9_50060' => 'lsa', 'Manes.01G043000' => 'mes', 'Manes.01G054900' => 'mes', 'Manes.02G000900' => 'mes', 'Manes.03G168700' => 'mes', 'Manes.14G000100' => 'mes', 'Mapoly0020s0077' => 'mpo', 'Mapoly0154s0024' => 'mpo', 'MBI04_g22064_MAGBIO' => 'mbi', 'MBI07_g11058_MAGBIO' => 'mbi', 'MBI11_g20199_MAGBIO' => 'mbi', 'MBI11_g20200_MAGBIO' => 'mbi', 'MBI11_g20621_MAGBIO' => 'mbi', 'MBI11_g25037_MAGBIO' => 'mbi', 'MBI12_g11797_MAGBIO' => 'mbi', 'MBI15_g24506_MAGBIO' => 'mbi', 'MBI16_g00831_MAGBIO' => 'mbi', 'MCO04G365' => 'mco', 'MCO12G174' => 'mco', 'MD00G1034500' => 'mdo', 'MD06G1122300' => 'mdo', 'MD07G1298700' => 'mdo', 'MD09G1168600' => 'mdo', 'MD10G1168000' => 'mdo', 'MD13G1135100' => 'mdo', 'MD13G1207400' => 'mdo', 'MD16G1209000' => 'mdo', 'MD17G1158100' => 'mdo', 'Medtr1g078030' => 'mtr', 'Medtr3g092640' => 'mtr', 'Medtr4g005140' => 'mtr', 'Medtr5g007030' => 'mtr', 'MELO3C005798.2' => 'cme', 'MELO3C006468.2' => 'cme', 'MELO3C016366.2' => 'cme', 'MELO3C023731.2' => 'cme', 'Migut.A01071' => 'egut', 'Migut.E00722' => 'egut', 'Migut.F00991' => 'egut', 'Migut.I01212' => 'egut', 'Migut.N00240' => 'egut', 'MSTRG.11572' => 'ama', 'MSTRG.12217' => 'ama', 'MSTRG.13699' => 'ama', 'MSTRG.24701' => 'ama', 'MSTRG.24875' => 'ama', 'MSTRG.8546' => 'ama', 'Nitab4.5_0000319g0060' => 'nta', 'Nitab4.5_0000499g0090' => 'nta', 'Nitab4.5_0001418g0090' => 'nta', 'Nitab4.5_0001418g0100' => 'nta', 'Nitab4.5_0001863g0020' => 'nta', 'Nitab4.5_0002158g0190' => 'nta', 'Nitab4.5_0002520g0070' => 'nta', 'Nitab4.5_0003419g0040' => 'nta', 'Nitab4.5_0004098g0010' => 'nta', 'Nitab4.5_0005036g0010' => 'nta', 'Nitab4.5_0005040g0010' => 'nta', 'Nitab4.5_0007409g0010' => 'nta', 'Nitab4.5_0012794g0010' => 'nta', 'Nn1g00440' => 'nnu', 'Nn1g02439' => 'nnu', 'Nn1g02613' => 'nnu', 'Nn3g18800' => 'nnu', 'Nn3g19541' => 'nnu', 'Nn5g26976' => 'nnu', 'Nn8g41214' => 'nnu', 'Oeu008794.2' => 'oeu', 'Oeu015755.1' => 'oeu', 'Oeu021653.1' => 'oeu', 'Oeu035083.1' => 'oeu', 'Oeu035084.1' => 'oeu', 'Oeu042859.1' => 'oeu', 'Oeu061028.1' => 'oeu', 'Os02g0468400' => 'osa', 'Os07g0185200' => 'osa', 'Peaxi162Scf00074g00017' => 'pax', 'Peaxi162Scf00300g00827' => 'pax', 'Peaxi162Scf00325g00099' => 'pax', 'Peaxi162Scf00542g00059' => 'pax', 'Peaxi162Scf00684g00414' => 'pax', 'PGR004G2641' => 'pgr', 'PGR031G3030' => 'pgr', 'PGR042G2611' => 'pgr', 'PGR102G0324' => 'pgr', 'PGR119G2414' => 'pgr', 'PGR142G3502' => 'pgr', 'PGSC0003DMG400003208' => 'stu', 'PGSC0003DMG400009197' => 'stu', 'PGSC0003DMG400009678' => 'stu', 'PGSC0003DMG400012110' => 'stu', 'PGSC0003DMG400016320' => 'stu', 'Phvul.002G042100' => 'pvu', 'Phvul.007G117200' => 'pvu', 'Phvul.009G045400' => 'pvu', 'Phvul.010G165300' => 'pvu', 'Potri.001G450100' => 'ptr', 'Potri.007G002700' => 'ptr', 'Potri.008G162600' => 'ptr', 'Potri.010G076500' => 'ptr', 'Potri.011G151500' => 'ptr', 'Potri.012G021400' => 'ptr', 'Potri.014G001100' => 'ptr', 'Potri.015G005000' => 'ptr', 'Pp3c15_18140' => 'ppa', 'Pp3c23_14010' => 'ppa', 'Pp3c9_22010' => 'ppa', 'PRCOL_00006985' => 'pco', 'Prupe.1G030900' => 'ppe', 'Prupe.1G210200' => 'ppe', 'Prupe.2G318500' => 'ppe', 'Prupe.3G027000' => 'ppe', 'Prupe.5G133300' => 'ppe', 'Psat2g189760' => 'psa', 'Psat5g072080' => 'psa', 'Psat6g052760' => 'psa', 'PSO063G0667' => 'pso', 'PSO063G2540' => 'pso', 'PSO170G5971' => 'pso', 'PSO210G3556' => 'pso', 'PSO384G0433' => 'pso', 'PSO782G4281' => 'pso', 'PSO832G1573' => 'pso', 'QL02p027280' => 'qlo', 'QL05p085514' => 'qlo', 'QL06p015767' => 'qlo', 'QL09p007219' => 'qlo', 'QL93p0113_0031' => 'qlo', 'RcHm_v2.0_Chr1g0356291' => 'rch', 'RcHm_v2.0_Chr1g0356301' => 'rch', 'RcHm_v2.0_Chr1g0382831' => 'rch', 'RcHm_v2.0_Chr2g0148611' => 'rch', 'RcHm_v2.0_Chr4g0390521' => 'rch', 'RcHm_v2.0_Chr4g0428201' => 'rch', 'RcHm_v2.0_Chr7g0187601' => 'rch', 'Rhsim02G0033100' => 'rsi', 'Rhsim02G0253900' => 'rsi', 'Rhsim03G0215200' => 'rsi', 'Rhsim04G0190200' => 'rsi', 'Rhsim08G0251900' => 'rsi', 'Sabra05G0139700' => 'sbr', 'Sabra07G0002000' => 'sbr', 'Sabra08G0124000' => 'sbr', 'Sabra10G0032200' => 'sbr', 'Sabra11G0136000' => 'sbr', 'Sabra11G0149100' => 'sbr', 'Sabra12G0012200' => 'sbr', 'Sabra14G0002700' => 'sbr', 'Sabra14G0003500' => 'sbr', 'Sabra15G0003500' => 'sbr', 'Sabra16G0304000' => 'sbr', 'SalBow2G2614' => 'sbo', 'SalBow3G4624' => 'sbo', 'SalBow6G4719' => 'sbo', 'Sc01g0010860' => 'sci', 'Sc13g0005050' => 'sci', 'Sc13g0006000' => 'sci', 'Sc15g0001170' => 'sci', 'Sc19g0000600' => 'sci', 'Sc19g0003780' => 'sci', 'Sed0002503' => 'sed', 'Sed0004019' => 'sed', 'Sed0017163' => 'sed', 'Sed0019938' => 'sed', 'Sed0020073' => 'sed', 'Sed0021271' => 'sed', 'SEGI_06290' => 'sgi', 'SEGI_11231' => 'sgi', 'SEGI_11875' => 'sgi', 'SEGI_20704' => 'sgi', 'SEGI_22459' => 'sgi', 'SGA_v2.0_scaffold104G30185' => 'sas', 'SGA_v2.0_scaffold104G30227' => 'sas', 'SGA_v2.0_scaffold122G33258' => 'sas', 'SGA_v2.0_scaffold165G38191' => 'sas', 'SGA_v2.0_scaffold308G48106' => 'sas', 'SGA_v2.0_scaffold36G14260' => 'sas', 'SGA_v2.0_scaffold36G14262' => 'sas', 'SGA_v2.0_scaffold71G24021' => 'sas', 'SHI00597' => 'shi', 'SMO141G0087' => 'smo', 'SMO364G0840' => 'smo', 'Solyc03g081320.3' => 'sly', 'Solyc03g124060.3' => 'sly', 'Solyc06g053790.3' => 'sly', 'Solyc08g083330.2' => 'sly', 'Sopen03g022040' => 'spe', 'Sopen03g041790' => 'spe', 'Sopen06g018910' => 'spe', 'Sopen08g031540' => 'spe', 'Sp1g41570' => 'spa', 'Sp2g00010' => 'spa', 'Sp3g11220' => 'spa', 'Sp3g20760' => 'spa', 'Sp6g16230' => 'spa', 'Sp7g12580' => 'spa', 'TAR362G0659' => 'tar', 'TAR365G0534' => 'tar', 'TAR374G1276' => 'tar', 'TAR375G0446' => 'tar', 'TAR383G0471' => 'tar', 'TAR626G0132' => 'tar', 'TAR626G0219' => 'tar', 'TAR626G0755' => 'tar', 'TAR626G0832' => 'tar', 'TAR629G2596' => 'tar', 'TAR636G0772' => 'tar', 'TAR636G1136' => 'tar', 'TAR718G0001' => 'tar', 'TAR718G0006' => 'tar', 'THA.LOC104804742' => 'tha', 'THA.LOC104804749' => 'tha', 'THA.LOC104808596' => 'tha', 'THA.LOC104815704' => 'tha', 'THA.LOC104817383' => 'tha', 'THA.LOC104822743' => 'tha', 'THA.LOC104823628' => 'tha', 'Thecc.03G208300' => 'tca', 'Thecc.03G217400' => 'tca', 'Thecc.04G246300' => 'tca', 'Thecc.06G052000' => 'tca', 'Thhalv10011546m.g' => 'esa', 'Thhalv10013518m.g' => 'esa', 'Thhalv10020751m.g' => 'esa', 'Thhalv10020844m.g' => 'esa', 'Thhalv10023504m.g' => 'esa', 'Thhalv10025252m.g' => 'esa', 'TPR.G33645' => 'tpr', 'TPR.G38035' => 'tpr', 'TPR.G38747' => 'tpr', 'TPR.G39886' => 'tpr', 'TWI09G0018' => 'twi', 'TWI12G0396' => 'twi', 'TWI15G0513' => 'twi', 'TWI60G1484' => 'twi', 'TWI73G1262' => 'twi', 'TWI81G0771' => 'twi', 'unitig_21.g20904' => 'ugi', 'unitig_22.g5632' => 'ugi', 'unitig_32.g10830' => 'ugi', 'unitig_578.g16676' => 'ugi', 'unitig_8.g3582' => 'ugi', 'vmacro06439' => 'vma', 'vmacro08413' => 'vma', 'vmacro08414' => 'vma', 'vmacro11485' => 'vma', 'vmacro15408' => 'vma', 'vmacro18725' => 'vma', 'vmacro22781' => 'vma', 'VMungo0251G1891' => 'vmu', 'VMungo0331G0118' => 'vmu', 'VMungo0720G2423' => 'vmu', 'VMungo1215G3141' => 'vmu', 'VMungo1309G0109' => 'vmu', 'Zm00001eb074680' => 'zma', 'Zm00001eb082000' => 'zma', 'Zm00001eb089010' => 'zma', 'Zm00001eb208580' => 'zma', 'Zm00001eb230750' => 'zma', 'Zm00001eb240920' => 'zma', 'Zm00001eb419490' => 'zma', 'Zm00001eb429740' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000989' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000989' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000989' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000989' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000989', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '609', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p23230' => 'bna', 'A01p32010' => 'bna', 'A01p40460' => 'bna', 'A03p38020' => 'bna', 'A05p25600' => 'bna', 'A08p11150' => 'bna', 'A09p23590' => 'bna', 'A10p11490' => 'bna', 'Aa31LG10G220' => 'aar', 'Aa31LG2G1770' => 'aar', 'Aa31LG3G9840' => 'aar', 'Aa31LG8G9560' => 'aar', 'Aa31sc109G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3729' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.3861' => 'aag', 'Actinidia04477' => 'ach', 'Actinidia08696' => 'ach', 'Actinidia22220' => 'ach', 'Actinidia34267' => 'ach', 'Actinidia38817' => 'ach', 'Actinidia40085' => 'ach', 'Ah.04g154120' => 'amhyb', 'Ah.07g204670' => 'amhyb', 'Ah.08g217990' => 'amhyb', 'Ah.12g053360' => 'amhyb', 'AL1G64210' => 'aly', 'AL2G10030' => 'aly', 'AL3G24790' => 'aly', 'AL3G37520' => 'aly', 'AL7G41630' => 'aly', 'AL8G29390' => 'aly', 'Aqoxy2G03224' => 'aox', 'Aqoxy5G00318' => 'aox', 'Aqoxy5G04343' => 'aox', 'Aqoxy7G02659' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3J84P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5L1PLW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CW4TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94SB72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ECX43N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FCN3VB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JEY2CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZMQ1W' => 'arhy', 'AT1G55960' => 'ath', 'AT1G64720' => 'ath', 'AT3G13062' => 'ath', 'AT3G23080' => 'ath', 'AT4G14500' => 'ath', 'AT5G54170' => 'ath', 'ATR0582G068' => 'atr', 'ATR0619G001' => 'atr', 'ATR0626G329' => 'atr', 'ATR0665G242' => 'atr', 'ATR0849G002' => 'atr', 'ATR1155G007' => 'atr', 'Atru.chr12.2425' => 'acertr', 'Atru.chr3.4100' => 'acertr', 'Atru.chr3.4101' => 'acertr', 'Atru.chr3.4104' => 'acertr', 'Atru.chr4.2228' => 'acertr', 'Atru.chr9.1848' => 'acertr', 'AUR62001309' => 'cqu', 'AUR62006008' => 'cqu', 'AUR62007080' => 'cqu', 'AUR62019943' => 'cqu', 'AUR62025691' => 'cqu', 'AUR62035618' => 'cqu', 'AUR62040381' => 'cqu', 'AUR62041209' => 'cqu', 'BcaB01g04282' => 'bca', 'BcaB04g18227' => 'bca', 'BcaB04g20473' => 'bca', 'BcaB04g20474' => 'bca', 'BcaB04g20476' => 'bca', 'BcaB06g26432' => 'bca', 'BcaB06g26433' => 'bca', 'BcaB06g26437' => 'bca', 'BcaB07g30726' => 'bca', 'BcaB07g33179' => 'bca', 'BcaC01g04007' => 'bca', 'BcaC01g06289' => 'bca', 'BcaC01g06290' => 'bca', 'BcaC01g06292' => 'bca', 'BcaC04g21554' => 'bca', 'BcaC05g27976' => 'bca', 'BcaC07g37823' => 'bca', 'BcaC08g43665' => 'bca', 'BcaC09g49244' => 'bca', 'BcaC09g50112' => 'bca', 'BcaNung00365' => 'bca', 'BNapus_Darmor_BZH_scaffold_273p00040' => 'bna', 'BolC1t02815H' => 'bol', 'BolC1t04051H' => 'bol', 'BolC1t05148H' => 'bol', 'BolC3t16883H' => 'bol', 'BolC5t32727H' => 'bol', 'BolC6t36168H' => 'bol', 'BolC8t48210H' => 'bol', 'BolC9t55905H' => 'bol', 'BolC9t57319H' => 'bol', 'BraA01t02233Z' => 'bra', 'BraA01t03326Z' => 'bra', 'BraA03t12954Z' => 'bra', 'BraA05t21442Z' => 'bra', 'BraA08t33112Z' => 'bra', 'BraA09t37963Z' => 'bra', 'BraA10t43243Z' => 'bra', 'BraSC56t46391Z' => 'bra', 'C01p28870' => 'bna', 'C01p41010' => 'bna', 'C01p52040' => 'bna', 'C01p52050' => 'bna', 'C03p17270' => 'bna', 'C03p44490' => 'bna', 'C03p46110' => 'bna', 'C05p39820' => 'bna', 'C06p10850' => 'bna', 'C09p30420' => 'bna', 'C09p44470' => 'bna', 'CAN.G251.6' => 'can', 'CAN.G303.13' => 'can', 'CAN.G567.107' => 'can', 'CAN.G790.1' => 'can', 'CANSAT01G0659' => 'cansat', 'CANSAT21G1654' => 'cansat', 'CANSAT21G1726' => 'cansat', 'CANSAT78G0202' => 'cansat', 'CARHR045700' => 'chi', 'CARHR046180' => 'chi', 'CARHR087630' => 'chi', 'CARHR098990' => 'chi', 'CARHR220720' => 'chi', 'CARHR267380' => 'chi', 'Carub.0001s4457' => 'cru', 'Carub.0002s0001' => 'cru', 'Carub.0003s1239' => 'cru', 'Carub.0003s2325' => 'cru', 'Carub.0007s2772' => 'cru', 'Carub.0008s1448' => 'cru', 'Ca_09941_v3' => 'car', 'Ca_09957_v3' => 'car', 'Ca_16776_v3' => 'car', 'Ca_24426_v3' => 'car', 'CBR_g32388' => 'cbr', 'Cc02_g00850' => 'ccan', 'Cc03_g04870' => 'ccan', 'Cc04_g00090' => 'ccan', 'Cc04_g00100' => 'ccan', 'Cc08_g16990' => 'ccan', 'CDE01G0627' => 'cde', 'CDE02G1618' => 'cde', 'CDE04G1464' => 'cde', 'CDE05G1780' => 'cde', 'CDE05G3314' => 'cde', 'CDE06G0858' => 'cde', 'CDE06G2166' => 'cde', 'CDE07G1991' => 'cde', 'CDE09G0488' => 'cde', 'CDE12G0073' => 'cde', 'CDE12G0836' => 'cde', 'Cfa008378' => 'cfa', 'Cfa011896' => 'cfa', 'Cfa016163' => 'cfa', 'Cfa023514' => 'cfa', 'Ciclev10005003m.g' => 'ccl', 'Ciclev10020224m.g' => 'ccl', 'Ciclev10020581m.g' => 'ccl', 'Ciclev10028538m.g' => 'ccl', 'CiPaw.01G093100' => 'cil', 'CiPaw.02G116200' => 'cil', 'CiPaw.05G205000' => 'cil', 'CiPaw.11G109800' => 'cil', 'CiPaw.12G075800' => 'cil', 'ClCG01G001390' => 'cla', 'ClCG05G004590' => 'cla', 'ClCG05G012260' => 'cla', 'ClCG07G008250' => 'cla', 'COL.COLO4_10831' => 'col', 'COL.COLO4_14367' => 'col', 'COL.COLO4_15793' => 'col', 'COL.COLO4_19515' => 'col', 'COL.COLO4_22565' => 'col', 'COL.COLO4_36692' => 'col', 'Cpa.g.sc10.6' => 'cpa', 'Cpa.g.sc3.156' => 'cpa', 'Cpa.g.sc37.100' => 'cpa', 'Cpa.g.sc58.49' => 'cpa', 'Cre01.g048701' => 'cre', 'Cre03.g174850' => 'cre', 'Cre03.g198050' => 'cre', 'CsaV3_3G012570' => 'csa', 'CsaV3_3G020170' => 'csa', 'CsaV3_4G005850' => 'csa', 'CsaV3_5G001520' => 'csa', 'CSS0006754' => 'camsi', 'CSS0013054' => 'camsi', 'CSS0018458' => 'camsi', 'CSS0020273' => 'camsi', 'CSS0021808' => 'camsi', 'CSS0029916' => 'camsi', 'CSS0031702' => 'camsi', 'CSS0035105' => 'camsi', 'CSS0036335' => 'camsi', 'CSS0045851' => 'camsi', 'CSS0050465' => 'camsi', 'DCAR_002350' => 'dca', 'DCAR_005499' => 'dca', 'DCAR_006566' => 'dca', 'DCAR_007675' => 'dca', 'DCAR_007676' => 'dca', 'DCAR_014563' => 'dca', 'DCAR_020370' => 'dca', 'DCAR_027278' => 'dca', 'Dinv12897' => 'din', 'Dinv18761' => 'din', 'Dinv20318' => 'din', 'Dinv29213' => 'din', 'Dinv29909' => 'din', 'Duzib052G0107' => 'dzi', 'Duzib068G0096' => 'dzi', 'Duzib068G1164' => 'dzi', 'Duzib084G1146' => 'dzi', 'Duzib192G0753' => 'dzi', 'Duzib205G0357' => 'dzi', 'Duzib212G0433' => 'dzi', 'Duzib235G1336' => 'dzi', 'ECA232G1648' => 'eca', 'ECA232G4302' => 'eca', 'ECA233G2065' => 'eca', 'ECA240G0410' => 'eca', 'ECA240G0748' => 'eca', 'EL10Ac2g04208' => 'bvu', 'EL10Ac3g05183' => 'bvu', 'EL10Ac5g12398' => 'bvu', 'EL10Ac7g18115' => 'bvu', 'EL10As18g24158' => 'bvu', 'Eucgr.D01658' => 'egr', 'Eucgr.E01072' => 'egr', 'Eucgr.F04053' => 'egr', 'Eucgr.H03157' => 'egr', 'Eucgr.J01696' => 'egr', 'Eucgr.K00428' => 'egr', 'FAN01G2256' => 'fan', 'FAN02G1918' => 'fan', 'FAN02G4168' => 'fan', 'FAN03G0537' => 'fan', 'FAN04G2039' => 'fan', 'FAN05G4662' => 'fan', 'FAN08G0172' => 'fan', 'FAN09G3581' => 'fan', 'FAN10G0985' => 'fan', 'FAN10G2232' => 'fan', 'FAN12G0922' => 'fan', 'FAN12G1302' => 'fan', 'FAN13G2159' => 'fan', 'FAN14G2118' => 'fan', 'FAN17G2115' => 'fan', 'FAN18G2710' => 'fan', 'FAN22G1634' => 'fan', 'FvH4_4g02700' => 'fve', 'FvH4_4g22000' => 'fve', 'FvH4_5g10520' => 'fve', 'FvH4_6g36480' => 'fve', 'FvH4_7g32880' => 'fve', 'Glyma.01G234700' => 'gma', 'Glyma.04G228700' => 'gma', 'Glyma.06G136200' => 'gma', 'Glyma.07G001000' => 'gma', 'Glyma.08G226000' => 'gma', 'Glyma.10G172100' => 'gma', 'Glyma.11G008200' => 'gma', 'Glyma.20G218200' => 'gma', 'Gohir.A01G024200' => 'ghi', 'Gohir.A03G088600' => 'ghi', 'Gohir.A05G116032' => 'ghi', 'Gohir.A09G057500' => 'ghi', 'Gohir.A09G187700' => 'ghi', 'Gohir.A11G017900' => 'ghi', 'Gohir.A12G246500' => 'ghi', 'Gohir.D01G022200' => 'ghi', 'Gohir.D02G105300' => 'ghi', 'Gohir.D05G116600' => 'ghi', 'Gohir.D09G056700' => 'ghi', 'Gohir.D09G182500' => 'ghi', 'Gohir.D11G017700' => 'ghi', 'Gohir.D12G247200' => 'ghi', 'Gorai.002G024700' => 'gra', 'Gorai.005G119500' => 'gra', 'Gorai.006G070300' => 'gra', 'Gorai.006G204800' => 'gra', 'Gorai.007G018700' => 'gra', 'Gorai.008G265200' => 'gra', 'Gorai.009G120600' => 'gra', 'GSVIVG01018120001' => 'vvi', 'GSVIVG01019684001' => 'vvi', 'GSVIVG01029461001' => 'vvi', 'HanXRQChr02g0047081' => 'han', 'HanXRQChr03g0085311' => 'han', 'HanXRQChr03g0092371' => 'han', 'HanXRQChr09g0250711' => 'han', 'HanXRQChr09g0277441' => 'han', 'HanXRQChr13g0415641' => 'han', 'HanXRQChr13g0415651' => 'han', 'HanXRQChr13g0415661' => 'han', 'HanXRQChr13g0424481' => 'han', 'Haze_00294' => 'cav', 'Haze_09203' => 'cav', 'Haze_11301' => 'cav', 'Haze_11303' => 'cav', 'Haze_16237' => 'cav', 'Haze_16238' => 'cav', 'Hma1.2p1_0141F.1_g064000' => 'hma', 'Hma1.2p1_0198F.1_g085250' => 'hma', 'Hma1.2p1_0650F.1_g195430' => 'hma', 'Hma1.2p1_1193F.1_g265690' => 'hma', 'Hma1.2p1_1276F.1_g272200' => 'hma', 'HPP92_003522' => 'vpl', 'HPP92_015881' => 'vpl', 'HPP92_018325' => 'vpl', 'HPP92_020929' => 'vpl', 'HPP92_020972' => 'vpl', 'HPP92_020973' => 'vpl', 'Hund05662' => 'sun', 'Hund09711' => 'sun', 'Hund21056' => 'sun', 'Hund24920' => 'sun', 'Lalb_Chr05g0211171' => 'lal', 'Lalb_Chr06g0168581' => 'lal', 'Lalb_Chr08g0239671' => 'lal', 'Lalb_Chr09g0320041' => 'lal', 'Lalb_Chr11g0067391' => 'lal', 'Lalb_Chr21g0311511' => 'lal', 'Lalb_Chr23g0271921' => 'lal', 'Lj1g0023310' => 'lja', 'Lj2A153T86' => 'lonja', 'Lj2A153T87' => 'lonja', 'Lj3C896T1' => 'lonja', 'Lj3g0006607' => 'lja', 'Lj5A20T31' => 'lonja', 'Lj5A20T32' => 'lonja', 'Lj5g0015545' => 'lja', 'Lj6A657G46' => 'lonja', 'LjContig00222g0016598' => 'lja', 'Lsat_1_v5_gn_3_123001' => 'lsa', 'Lsat_1_v5_gn_4_106160' => 'lsa', 'Lsat_1_v5_gn_6_81481' => 'lsa', 'Lsat_1_v5_gn_8_4420' => 'lsa', 'Lsat_1_v5_gn_9_50060' => 'lsa', 'Manes.01G043000' => 'mes', 'Manes.01G054900' => 'mes', 'Manes.02G000900' => 'mes', 'Manes.03G168700' => 'mes', 'Manes.14G000100' => 'mes', 'Mapoly0020s0077' => 'mpo', 'Mapoly0154s0024' => 'mpo', 'MBI04_g22064_MAGBIO' => 'mbi', 'MBI07_g11058_MAGBIO' => 'mbi', 'MBI11_g20199_MAGBIO' => 'mbi', 'MBI11_g20200_MAGBIO' => 'mbi', 'MBI11_g20621_MAGBIO' => 'mbi', 'MBI11_g25037_MAGBIO' => 'mbi', 'MBI12_g11797_MAGBIO' => 'mbi', 'MBI15_g24506_MAGBIO' => 'mbi', 'MBI16_g00831_MAGBIO' => 'mbi', 'MCO04G365' => 'mco', 'MCO12G174' => 'mco', 'MD00G1034500' => 'mdo', 'MD06G1122300' => 'mdo', 'MD07G1298700' => 'mdo', 'MD09G1168600' => 'mdo', 'MD10G1168000' => 'mdo', 'MD13G1135100' => 'mdo', 'MD13G1207400' => 'mdo', 'MD16G1209000' => 'mdo', 'MD17G1158100' => 'mdo', 'Medtr1g078030' => 'mtr', 'Medtr3g092640' => 'mtr', 'Medtr4g005140' => 'mtr', 'Medtr5g007030' => 'mtr', 'MELO3C005798.2' => 'cme', 'MELO3C006468.2' => 'cme', 'MELO3C016366.2' => 'cme', 'MELO3C023731.2' => 'cme', 'Migut.A01071' => 'egut', 'Migut.E00722' => 'egut', 'Migut.F00991' => 'egut', 'Migut.I01212' => 'egut', 'Migut.N00240' => 'egut', 'MSTRG.11572' => 'ama', 'MSTRG.12217' => 'ama', 'MSTRG.13699' => 'ama', 'MSTRG.24701' => 'ama', 'MSTRG.24875' => 'ama', 'MSTRG.8546' => 'ama', 'Nitab4.5_0000319g0060' => 'nta', 'Nitab4.5_0000499g0090' => 'nta', 'Nitab4.5_0001418g0090' => 'nta', 'Nitab4.5_0001418g0100' => 'nta', 'Nitab4.5_0001863g0020' => 'nta', 'Nitab4.5_0002158g0190' => 'nta', 'Nitab4.5_0002520g0070' => 'nta', 'Nitab4.5_0003419g0040' => 'nta', 'Nitab4.5_0004098g0010' => 'nta', 'Nitab4.5_0005036g0010' => 'nta', 'Nitab4.5_0005040g0010' => 'nta', 'Nitab4.5_0007409g0010' => 'nta', 'Nitab4.5_0012794g0010' => 'nta', 'Nn1g00440' => 'nnu', 'Nn1g02439' => 'nnu', 'Nn1g02613' => 'nnu', 'Nn3g18800' => 'nnu', 'Nn3g19541' => 'nnu', 'Nn5g26976' => 'nnu', 'Nn8g41214' => 'nnu', 'Oeu008794.2' => 'oeu', 'Oeu015755.1' => 'oeu', 'Oeu021653.1' => 'oeu', 'Oeu035083.1' => 'oeu', 'Oeu035084.1' => 'oeu', 'Oeu042859.1' => 'oeu', 'Oeu061028.1' => 'oeu', 'Os02g0468400' => 'osa', 'Os07g0185200' => 'osa', 'Peaxi162Scf00074g00017' => 'pax', 'Peaxi162Scf00300g00827' => 'pax', 'Peaxi162Scf00325g00099' => 'pax', 'Peaxi162Scf00542g00059' => 'pax', 'Peaxi162Scf00684g00414' => 'pax', 'PGR004G2641' => 'pgr', 'PGR031G3030' => 'pgr', 'PGR042G2611' => 'pgr', 'PGR102G0324' => 'pgr', 'PGR119G2414' => 'pgr', 'PGR142G3502' => 'pgr', 'PGSC0003DMG400003208' => 'stu', 'PGSC0003DMG400009197' => 'stu', 'PGSC0003DMG400009678' => 'stu', 'PGSC0003DMG400012110' => 'stu', 'PGSC0003DMG400016320' => 'stu', 'Phvul.002G042100' => 'pvu', 'Phvul.007G117200' => 'pvu', 'Phvul.009G045400' => 'pvu', 'Phvul.010G165300' => 'pvu', 'Potri.001G450100' => 'ptr', 'Potri.007G002700' => 'ptr', 'Potri.008G162600' => 'ptr', 'Potri.010G076500' => 'ptr', 'Potri.011G151500' => 'ptr', 'Potri.012G021400' => 'ptr', 'Potri.014G001100' => 'ptr', 'Potri.015G005000' => 'ptr', 'Pp3c15_18140' => 'ppa', 'Pp3c23_14010' => 'ppa', 'Pp3c9_22010' => 'ppa', 'PRCOL_00006985' => 'pco', 'Prupe.1G030900' => 'ppe', 'Prupe.1G210200' => 'ppe', 'Prupe.2G318500' => 'ppe', 'Prupe.3G027000' => 'ppe', 'Prupe.5G133300' => 'ppe', 'Psat2g189760' => 'psa', 'Psat5g072080' => 'psa', 'Psat6g052760' => 'psa', 'PSO063G0667' => 'pso', 'PSO063G2540' => 'pso', 'PSO170G5971' => 'pso', 'PSO210G3556' => 'pso', 'PSO384G0433' => 'pso', 'PSO782G4281' => 'pso', 'PSO832G1573' => 'pso', 'QL02p027280' => 'qlo', 'QL05p085514' => 'qlo', 'QL06p015767' => 'qlo', 'QL09p007219' => 'qlo', 'QL93p0113_0031' => 'qlo', 'RcHm_v2.0_Chr1g0356291' => 'rch', 'RcHm_v2.0_Chr1g0356301' => 'rch', 'RcHm_v2.0_Chr1g0382831' => 'rch', 'RcHm_v2.0_Chr2g0148611' => 'rch', 'RcHm_v2.0_Chr4g0390521' => 'rch', 'RcHm_v2.0_Chr4g0428201' => 'rch', 'RcHm_v2.0_Chr7g0187601' => 'rch', 'Rhsim02G0033100' => 'rsi', 'Rhsim02G0253900' => 'rsi', 'Rhsim03G0215200' => 'rsi', 'Rhsim04G0190200' => 'rsi', 'Rhsim08G0251900' => 'rsi', 'Sabra05G0139700' => 'sbr', 'Sabra07G0002000' => 'sbr', 'Sabra08G0124000' => 'sbr', 'Sabra10G0032200' => 'sbr', 'Sabra11G0136000' => 'sbr', 'Sabra11G0149100' => 'sbr', 'Sabra12G0012200' => 'sbr', 'Sabra14G0002700' => 'sbr', 'Sabra14G0003500' => 'sbr', 'Sabra15G0003500' => 'sbr', 'Sabra16G0304000' => 'sbr', 'SalBow2G2614' => 'sbo', 'SalBow3G4624' => 'sbo', 'SalBow6G4719' => 'sbo', 'Sc01g0010860' => 'sci', 'Sc13g0005050' => 'sci', 'Sc13g0006000' => 'sci', 'Sc15g0001170' => 'sci', 'Sc19g0000600' => 'sci', 'Sc19g0003780' => 'sci', 'Sed0002503' => 'sed', 'Sed0004019' => 'sed', 'Sed0017163' => 'sed', 'Sed0019938' => 'sed', 'Sed0020073' => 'sed', 'Sed0021271' => 'sed', 'SEGI_06290' => 'sgi', 'SEGI_11231' => 'sgi', 'SEGI_11875' => 'sgi', 'SEGI_20704' => 'sgi', 'SEGI_22459' => 'sgi', 'SGA_v2.0_scaffold104G30185' => 'sas', 'SGA_v2.0_scaffold104G30227' => 'sas', 'SGA_v2.0_scaffold122G33258' => 'sas', 'SGA_v2.0_scaffold165G38191' => 'sas', 'SGA_v2.0_scaffold308G48106' => 'sas', 'SGA_v2.0_scaffold36G14260' => 'sas', 'SGA_v2.0_scaffold36G14262' => 'sas', 'SGA_v2.0_scaffold71G24021' => 'sas', 'SHI00597' => 'shi', 'SMO141G0087' => 'smo', 'SMO364G0840' => 'smo', 'Solyc03g081320.3' => 'sly', 'Solyc03g124060.3' => 'sly', 'Solyc06g053790.3' => 'sly', 'Solyc08g083330.2' => 'sly', 'Sopen03g022040' => 'spe', 'Sopen03g041790' => 'spe', 'Sopen06g018910' => 'spe', 'Sopen08g031540' => 'spe', 'Sp1g41570' => 'spa', 'Sp2g00010' => 'spa', 'Sp3g11220' => 'spa', 'Sp3g20760' => 'spa', 'Sp6g16230' => 'spa', 'Sp7g12580' => 'spa', 'TAR362G0659' => 'tar', 'TAR365G0534' => 'tar', 'TAR374G1276' => 'tar', 'TAR375G0446' => 'tar', 'TAR383G0471' => 'tar', 'TAR626G0132' => 'tar', 'TAR626G0219' => 'tar', 'TAR626G0755' => 'tar', 'TAR626G0832' => 'tar', 'TAR629G2596' => 'tar', 'TAR636G0772' => 'tar', 'TAR636G1136' => 'tar', 'TAR718G0001' => 'tar', 'TAR718G0006' => 'tar', 'THA.LOC104804742' => 'tha', 'THA.LOC104804749' => 'tha', 'THA.LOC104808596' => 'tha', 'THA.LOC104815704' => 'tha', 'THA.LOC104817383' => 'tha', 'THA.LOC104822743' => 'tha', 'THA.LOC104823628' => 'tha', 'Thecc.03G208300' => 'tca', 'Thecc.03G217400' => 'tca', 'Thecc.04G246300' => 'tca', 'Thecc.06G052000' => 'tca', 'Thhalv10011546m.g' => 'esa', 'Thhalv10013518m.g' => 'esa', 'Thhalv10020751m.g' => 'esa', 'Thhalv10020844m.g' => 'esa', 'Thhalv10023504m.g' => 'esa', 'Thhalv10025252m.g' => 'esa', 'TPR.G33645' => 'tpr', 'TPR.G38035' => 'tpr', 'TPR.G38747' => 'tpr', 'TPR.G39886' => 'tpr', 'TWI09G0018' => 'twi', 'TWI12G0396' => 'twi', 'TWI15G0513' => 'twi', 'TWI60G1484' => 'twi', 'TWI73G1262' => 'twi', 'TWI81G0771' => 'twi', 'unitig_21.g20904' => 'ugi', 'unitig_22.g5632' => 'ugi', 'unitig_32.g10830' => 'ugi', 'unitig_578.g16676' => 'ugi', 'unitig_8.g3582' => 'ugi', 'vmacro06439' => 'vma', 'vmacro08413' => 'vma', 'vmacro08414' => 'vma', 'vmacro11485' => 'vma', 'vmacro15408' => 'vma', 'vmacro18725' => 'vma', 'vmacro22781' => 'vma', 'VMungo0251G1891' => 'vmu', 'VMungo0331G0118' => 'vmu', 'VMungo0720G2423' => 'vmu', 'VMungo1215G3141' => 'vmu', 'VMungo1309G0109' => 'vmu', 'Zm00001eb074680' => 'zma', 'Zm00001eb082000' => 'zma', 'Zm00001eb089010' => 'zma', 'Zm00001eb208580' => 'zma', 'Zm00001eb230750' => 'zma', 'Zm00001eb240920' => 'zma', 'Zm00001eb419490' => 'zma', 'Zm00001eb429740' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000989', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000989' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000989', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '609', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000989' ) ), 'genes' => array( 'A01p23230' => 'bna', 'A01p32010' => 'bna', 'A01p40460' => 'bna', 'A03p38020' => 'bna', 'A05p25600' => 'bna', 'A08p11150' => 'bna', 'A09p23590' => 'bna', 'A10p11490' => 'bna', 'Aa31LG10G220' => 'aar', 'Aa31LG2G1770' => 'aar', 'Aa31LG3G9840' => 'aar', 'Aa31LG8G9560' => 'aar', 'Aa31sc109G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3729' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.3861' => 'aag', 'Actinidia04477' => 'ach', 'Actinidia08696' => 'ach', 'Actinidia22220' => 'ach', 'Actinidia34267' => 'ach', 'Actinidia38817' => 'ach', 'Actinidia40085' => 'ach', 'Ah.04g154120' => 'amhyb', 'Ah.07g204670' => 'amhyb', 'Ah.08g217990' => 'amhyb', 'Ah.12g053360' => 'amhyb', 'AL1G64210' => 'aly', 'AL2G10030' => 'aly', 'AL3G24790' => 'aly', 'AL3G37520' => 'aly', 'AL7G41630' => 'aly', 'AL8G29390' => 'aly', 'Aqoxy2G03224' => 'aox', 'Aqoxy5G00318' => 'aox', 'Aqoxy5G04343' => 'aox', 'Aqoxy7G02659' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3J84P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5L1PLW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CW4TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94SB72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ECX43N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FCN3VB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JEY2CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZMQ1W' => 'arhy', 'AT1G55960' => 'ath', 'AT1G64720' => 'ath', 'AT3G13062' => 'ath', 'AT3G23080' => 'ath', 'AT4G14500' => 'ath', 'AT5G54170' => 'ath', 'ATR0582G068' => 'atr', 'ATR0619G001' => 'atr', 'ATR0626G329' => 'atr', 'ATR0665G242' => 'atr', 'ATR0849G002' => 'atr', 'ATR1155G007' => 'atr', 'Atru.chr12.2425' => 'acertr', 'Atru.chr3.4100' => 'acertr', 'Atru.chr3.4101' => 'acertr', 'Atru.chr3.4104' => 'acertr', 'Atru.chr4.2228' => 'acertr', 'Atru.chr9.1848' => 'acertr', 'AUR62001309' => 'cqu', 'AUR62006008' => 'cqu', 'AUR62007080' => 'cqu', 'AUR62019943' => 'cqu', 'AUR62025691' => 'cqu', 'AUR62035618' => 'cqu', 'AUR62040381' => 'cqu', 'AUR62041209' => 'cqu', 'BcaB01g04282' => 'bca', 'BcaB04g18227' => 'bca', 'BcaB04g20473' => 'bca', 'BcaB04g20474' => 'bca', 'BcaB04g20476' => 'bca', 'BcaB06g26432' => 'bca', 'BcaB06g26433' => 'bca', 'BcaB06g26437' => 'bca', 'BcaB07g30726' => 'bca', 'BcaB07g33179' => 'bca', 'BcaC01g04007' => 'bca', 'BcaC01g06289' => 'bca', 'BcaC01g06290' => 'bca', 'BcaC01g06292' => 'bca', 'BcaC04g21554' => 'bca', 'BcaC05g27976' => 'bca', 'BcaC07g37823' => 'bca', 'BcaC08g43665' => 'bca', 'BcaC09g49244' => 'bca', 'BcaC09g50112' => 'bca', 'BcaNung00365' => 'bca', 'BNapus_Darmor_BZH_scaffold_273p00040' => 'bna', 'BolC1t02815H' => 'bol', 'BolC1t04051H' => 'bol', 'BolC1t05148H' => 'bol', 'BolC3t16883H' => 'bol', 'BolC5t32727H' => 'bol', 'BolC6t36168H' => 'bol', 'BolC8t48210H' => 'bol', 'BolC9t55905H' => 'bol', 'BolC9t57319H' => 'bol', 'BraA01t02233Z' => 'bra', 'BraA01t03326Z' => 'bra', 'BraA03t12954Z' => 'bra', 'BraA05t21442Z' => 'bra', 'BraA08t33112Z' => 'bra', 'BraA09t37963Z' => 'bra', 'BraA10t43243Z' => 'bra', 'BraSC56t46391Z' => 'bra', 'C01p28870' => 'bna', 'C01p41010' => 'bna', 'C01p52040' => 'bna', 'C01p52050' => 'bna', 'C03p17270' => 'bna', 'C03p44490' => 'bna', 'C03p46110' => 'bna', 'C05p39820' => 'bna', 'C06p10850' => 'bna', 'C09p30420' => 'bna', 'C09p44470' => 'bna', 'CAN.G251.6' => 'can', 'CAN.G303.13' => 'can', 'CAN.G567.107' => 'can', 'CAN.G790.1' => 'can', 'CANSAT01G0659' => 'cansat', 'CANSAT21G1654' => 'cansat', 'CANSAT21G1726' => 'cansat', 'CANSAT78G0202' => 'cansat', 'CARHR045700' => 'chi', 'CARHR046180' => 'chi', 'CARHR087630' => 'chi', 'CARHR098990' => 'chi', 'CARHR220720' => 'chi', 'CARHR267380' => 'chi', 'Carub.0001s4457' => 'cru', 'Carub.0002s0001' => 'cru', 'Carub.0003s1239' => 'cru', 'Carub.0003s2325' => 'cru', 'Carub.0007s2772' => 'cru', 'Carub.0008s1448' => 'cru', 'Ca_09941_v3' => 'car', 'Ca_09957_v3' => 'car', 'Ca_16776_v3' => 'car', 'Ca_24426_v3' => 'car', 'CBR_g32388' => 'cbr', 'Cc02_g00850' => 'ccan', 'Cc03_g04870' => 'ccan', 'Cc04_g00090' => 'ccan', 'Cc04_g00100' => 'ccan', 'Cc08_g16990' => 'ccan', 'CDE01G0627' => 'cde', 'CDE02G1618' => 'cde', 'CDE04G1464' => 'cde', 'CDE05G1780' => 'cde', 'CDE05G3314' => 'cde', 'CDE06G0858' => 'cde', 'CDE06G2166' => 'cde', 'CDE07G1991' => 'cde', 'CDE09G0488' => 'cde', 'CDE12G0073' => 'cde', 'CDE12G0836' => 'cde', 'Cfa008378' => 'cfa', 'Cfa011896' => 'cfa', 'Cfa016163' => 'cfa', 'Cfa023514' => 'cfa', 'Ciclev10005003m.g' => 'ccl', 'Ciclev10020224m.g' => 'ccl', 'Ciclev10020581m.g' => 'ccl', 'Ciclev10028538m.g' => 'ccl', 'CiPaw.01G093100' => 'cil', 'CiPaw.02G116200' => 'cil', 'CiPaw.05G205000' => 'cil', 'CiPaw.11G109800' => 'cil', 'CiPaw.12G075800' => 'cil', 'ClCG01G001390' => 'cla', 'ClCG05G004590' => 'cla', 'ClCG05G012260' => 'cla', 'ClCG07G008250' => 'cla', 'COL.COLO4_10831' => 'col', 'COL.COLO4_14367' => 'col', 'COL.COLO4_15793' => 'col', 'COL.COLO4_19515' => 'col', 'COL.COLO4_22565' => 'col', 'COL.COLO4_36692' => 'col', 'Cpa.g.sc10.6' => 'cpa', 'Cpa.g.sc3.156' => 'cpa', 'Cpa.g.sc37.100' => 'cpa', 'Cpa.g.sc58.49' => 'cpa', 'Cre01.g048701' => 'cre', 'Cre03.g174850' => 'cre', 'Cre03.g198050' => 'cre', 'CsaV3_3G012570' => 'csa', 'CsaV3_3G020170' => 'csa', 'CsaV3_4G005850' => 'csa', 'CsaV3_5G001520' => 'csa', 'CSS0006754' => 'camsi', 'CSS0013054' => 'camsi', 'CSS0018458' => 'camsi', 'CSS0020273' => 'camsi', 'CSS0021808' => 'camsi', 'CSS0029916' => 'camsi', 'CSS0031702' => 'camsi', 'CSS0035105' => 'camsi', 'CSS0036335' => 'camsi', 'CSS0045851' => 'camsi', 'CSS0050465' => 'camsi', 'DCAR_002350' => 'dca', 'DCAR_005499' => 'dca', 'DCAR_006566' => 'dca', 'DCAR_007675' => 'dca', 'DCAR_007676' => 'dca', 'DCAR_014563' => 'dca', 'DCAR_020370' => 'dca', 'DCAR_027278' => 'dca', 'Dinv12897' => 'din', 'Dinv18761' => 'din', 'Dinv20318' => 'din', 'Dinv29213' => 'din', 'Dinv29909' => 'din', 'Duzib052G0107' => 'dzi', 'Duzib068G0096' => 'dzi', 'Duzib068G1164' => 'dzi', 'Duzib084G1146' => 'dzi', 'Duzib192G0753' => 'dzi', 'Duzib205G0357' => 'dzi', 'Duzib212G0433' => 'dzi', 'Duzib235G1336' => 'dzi', 'ECA232G1648' => 'eca', 'ECA232G4302' => 'eca', 'ECA233G2065' => 'eca', 'ECA240G0410' => 'eca', 'ECA240G0748' => 'eca', 'EL10Ac2g04208' => 'bvu', 'EL10Ac3g05183' => 'bvu', 'EL10Ac5g12398' => 'bvu', 'EL10Ac7g18115' => 'bvu', 'EL10As18g24158' => 'bvu', 'Eucgr.D01658' => 'egr', 'Eucgr.E01072' => 'egr', 'Eucgr.F04053' => 'egr', 'Eucgr.H03157' => 'egr', 'Eucgr.J01696' => 'egr', 'Eucgr.K00428' => 'egr', 'FAN01G2256' => 'fan', 'FAN02G1918' => 'fan', 'FAN02G4168' => 'fan', 'FAN03G0537' => 'fan', 'FAN04G2039' => 'fan', 'FAN05G4662' => 'fan', 'FAN08G0172' => 'fan', 'FAN09G3581' => 'fan', 'FAN10G0985' => 'fan', 'FAN10G2232' => 'fan', 'FAN12G0922' => 'fan', 'FAN12G1302' => 'fan', 'FAN13G2159' => 'fan', 'FAN14G2118' => 'fan', 'FAN17G2115' => 'fan', 'FAN18G2710' => 'fan', 'FAN22G1634' => 'fan', 'FvH4_4g02700' => 'fve', 'FvH4_4g22000' => 'fve', 'FvH4_5g10520' => 'fve', 'FvH4_6g36480' => 'fve', 'FvH4_7g32880' => 'fve', 'Glyma.01G234700' => 'gma', 'Glyma.04G228700' => 'gma', 'Glyma.06G136200' => 'gma', 'Glyma.07G001000' => 'gma', 'Glyma.08G226000' => 'gma', 'Glyma.10G172100' => 'gma', 'Glyma.11G008200' => 'gma', 'Glyma.20G218200' => 'gma', 'Gohir.A01G024200' => 'ghi', 'Gohir.A03G088600' => 'ghi', 'Gohir.A05G116032' => 'ghi', 'Gohir.A09G057500' => 'ghi', 'Gohir.A09G187700' => 'ghi', 'Gohir.A11G017900' => 'ghi', 'Gohir.A12G246500' => 'ghi', 'Gohir.D01G022200' => 'ghi', 'Gohir.D02G105300' => 'ghi', 'Gohir.D05G116600' => 'ghi', 'Gohir.D09G056700' => 'ghi', 'Gohir.D09G182500' => 'ghi', 'Gohir.D11G017700' => 'ghi', 'Gohir.D12G247200' => 'ghi', 'Gorai.002G024700' => 'gra', 'Gorai.005G119500' => 'gra', 'Gorai.006G070300' => 'gra', 'Gorai.006G204800' => 'gra', 'Gorai.007G018700' => 'gra', 'Gorai.008G265200' => 'gra', 'Gorai.009G120600' => 'gra', 'GSVIVG01018120001' => 'vvi', 'GSVIVG01019684001' => 'vvi', 'GSVIVG01029461001' => 'vvi', 'HanXRQChr02g0047081' => 'han', 'HanXRQChr03g0085311' => 'han', 'HanXRQChr03g0092371' => 'han', 'HanXRQChr09g0250711' => 'han', 'HanXRQChr09g0277441' => 'han', 'HanXRQChr13g0415641' => 'han', 'HanXRQChr13g0415651' => 'han', 'HanXRQChr13g0415661' => 'han', 'HanXRQChr13g0424481' => 'han', 'Haze_00294' => 'cav', 'Haze_09203' => 'cav', 'Haze_11301' => 'cav', 'Haze_11303' => 'cav', 'Haze_16237' => 'cav', 'Haze_16238' => 'cav', 'Hma1.2p1_0141F.1_g064000' => 'hma', 'Hma1.2p1_0198F.1_g085250' => 'hma', 'Hma1.2p1_0650F.1_g195430' => 'hma', 'Hma1.2p1_1193F.1_g265690' => 'hma', 'Hma1.2p1_1276F.1_g272200' => 'hma', 'HPP92_003522' => 'vpl', 'HPP92_015881' => 'vpl', 'HPP92_018325' => 'vpl', 'HPP92_020929' => 'vpl', 'HPP92_020972' => 'vpl', 'HPP92_020973' => 'vpl', 'Hund05662' => 'sun', 'Hund09711' => 'sun', 'Hund21056' => 'sun', 'Hund24920' => 'sun', 'Lalb_Chr05g0211171' => 'lal', 'Lalb_Chr06g0168581' => 'lal', 'Lalb_Chr08g0239671' => 'lal', 'Lalb_Chr09g0320041' => 'lal', 'Lalb_Chr11g0067391' => 'lal', 'Lalb_Chr21g0311511' => 'lal', 'Lalb_Chr23g0271921' => 'lal', 'Lj1g0023310' => 'lja', 'Lj2A153T86' => 'lonja', 'Lj2A153T87' => 'lonja', 'Lj3C896T1' => 'lonja', 'Lj3g0006607' => 'lja', 'Lj5A20T31' => 'lonja', 'Lj5A20T32' => 'lonja', 'Lj5g0015545' => 'lja', 'Lj6A657G46' => 'lonja', 'LjContig00222g0016598' => 'lja', 'Lsat_1_v5_gn_3_123001' => 'lsa', 'Lsat_1_v5_gn_4_106160' => 'lsa', 'Lsat_1_v5_gn_6_81481' => 'lsa', 'Lsat_1_v5_gn_8_4420' => 'lsa', 'Lsat_1_v5_gn_9_50060' => 'lsa', 'Manes.01G043000' => 'mes', 'Manes.01G054900' => 'mes', 'Manes.02G000900' => 'mes', 'Manes.03G168700' => 'mes', 'Manes.14G000100' => 'mes', 'Mapoly0020s0077' => 'mpo', 'Mapoly0154s0024' => 'mpo', 'MBI04_g22064_MAGBIO' => 'mbi', 'MBI07_g11058_MAGBIO' => 'mbi', 'MBI11_g20199_MAGBIO' => 'mbi', 'MBI11_g20200_MAGBIO' => 'mbi', 'MBI11_g20621_MAGBIO' => 'mbi', 'MBI11_g25037_MAGBIO' => 'mbi', 'MBI12_g11797_MAGBIO' => 'mbi', 'MBI15_g24506_MAGBIO' => 'mbi', 'MBI16_g00831_MAGBIO' => 'mbi', 'MCO04G365' => 'mco', 'MCO12G174' => 'mco', 'MD00G1034500' => 'mdo', 'MD06G1122300' => 'mdo', 'MD07G1298700' => 'mdo', 'MD09G1168600' => 'mdo', 'MD10G1168000' => 'mdo', 'MD13G1135100' => 'mdo', 'MD13G1207400' => 'mdo', 'MD16G1209000' => 'mdo', 'MD17G1158100' => 'mdo', 'Medtr1g078030' => 'mtr', 'Medtr3g092640' => 'mtr', 'Medtr4g005140' => 'mtr', 'Medtr5g007030' => 'mtr', 'MELO3C005798.2' => 'cme', 'MELO3C006468.2' => 'cme', 'MELO3C016366.2' => 'cme', 'MELO3C023731.2' => 'cme', 'Migut.A01071' => 'egut', 'Migut.E00722' => 'egut', 'Migut.F00991' => 'egut', 'Migut.I01212' => 'egut', 'Migut.N00240' => 'egut', 'MSTRG.11572' => 'ama', 'MSTRG.12217' => 'ama', 'MSTRG.13699' => 'ama', 'MSTRG.24701' => 'ama', 'MSTRG.24875' => 'ama', 'MSTRG.8546' => 'ama', 'Nitab4.5_0000319g0060' => 'nta', 'Nitab4.5_0000499g0090' => 'nta', 'Nitab4.5_0001418g0090' => 'nta', 'Nitab4.5_0001418g0100' => 'nta', 'Nitab4.5_0001863g0020' => 'nta', 'Nitab4.5_0002158g0190' => 'nta', 'Nitab4.5_0002520g0070' => 'nta', 'Nitab4.5_0003419g0040' => 'nta', 'Nitab4.5_0004098g0010' => 'nta', 'Nitab4.5_0005036g0010' => 'nta', 'Nitab4.5_0005040g0010' => 'nta', 'Nitab4.5_0007409g0010' => 'nta', 'Nitab4.5_0012794g0010' => 'nta', 'Nn1g00440' => 'nnu', 'Nn1g02439' => 'nnu', 'Nn1g02613' => 'nnu', 'Nn3g18800' => 'nnu', 'Nn3g19541' => 'nnu', 'Nn5g26976' => 'nnu', 'Nn8g41214' => 'nnu', 'Oeu008794.2' => 'oeu', 'Oeu015755.1' => 'oeu', 'Oeu021653.1' => 'oeu', 'Oeu035083.1' => 'oeu', 'Oeu035084.1' => 'oeu', 'Oeu042859.1' => 'oeu', 'Oeu061028.1' => 'oeu', 'Os02g0468400' => 'osa', 'Os07g0185200' => 'osa', 'Peaxi162Scf00074g00017' => 'pax', 'Peaxi162Scf00300g00827' => 'pax', 'Peaxi162Scf00325g00099' => 'pax', 'Peaxi162Scf00542g00059' => 'pax', 'Peaxi162Scf00684g00414' => 'pax', 'PGR004G2641' => 'pgr', 'PGR031G3030' => 'pgr', 'PGR042G2611' => 'pgr', 'PGR102G0324' => 'pgr', 'PGR119G2414' => 'pgr', 'PGR142G3502' => 'pgr', 'PGSC0003DMG400003208' => 'stu', 'PGSC0003DMG400009197' => 'stu', 'PGSC0003DMG400009678' => 'stu', 'PGSC0003DMG400012110' => 'stu', 'PGSC0003DMG400016320' => 'stu', 'Phvul.002G042100' => 'pvu', 'Phvul.007G117200' => 'pvu', 'Phvul.009G045400' => 'pvu', 'Phvul.010G165300' => 'pvu', 'Potri.001G450100' => 'ptr', 'Potri.007G002700' => 'ptr', 'Potri.008G162600' => 'ptr', 'Potri.010G076500' => 'ptr', 'Potri.011G151500' => 'ptr', 'Potri.012G021400' => 'ptr', 'Potri.014G001100' => 'ptr', 'Potri.015G005000' => 'ptr', 'Pp3c15_18140' => 'ppa', 'Pp3c23_14010' => 'ppa', 'Pp3c9_22010' => 'ppa', 'PRCOL_00006985' => 'pco', 'Prupe.1G030900' => 'ppe', 'Prupe.1G210200' => 'ppe', 'Prupe.2G318500' => 'ppe', 'Prupe.3G027000' => 'ppe', 'Prupe.5G133300' => 'ppe', 'Psat2g189760' => 'psa', 'Psat5g072080' => 'psa', 'Psat6g052760' => 'psa', 'PSO063G0667' => 'pso', 'PSO063G2540' => 'pso', 'PSO170G5971' => 'pso', 'PSO210G3556' => 'pso', 'PSO384G0433' => 'pso', 'PSO782G4281' => 'pso', 'PSO832G1573' => 'pso', 'QL02p027280' => 'qlo', 'QL05p085514' => 'qlo', 'QL06p015767' => 'qlo', 'QL09p007219' => 'qlo', 'QL93p0113_0031' => 'qlo', 'RcHm_v2.0_Chr1g0356291' => 'rch', 'RcHm_v2.0_Chr1g0356301' => 'rch', 'RcHm_v2.0_Chr1g0382831' => 'rch', 'RcHm_v2.0_Chr2g0148611' => 'rch', 'RcHm_v2.0_Chr4g0390521' => 'rch', 'RcHm_v2.0_Chr4g0428201' => 'rch', 'RcHm_v2.0_Chr7g0187601' => 'rch', 'Rhsim02G0033100' => 'rsi', 'Rhsim02G0253900' => 'rsi', 'Rhsim03G0215200' => 'rsi', 'Rhsim04G0190200' => 'rsi', 'Rhsim08G0251900' => 'rsi', 'Sabra05G0139700' => 'sbr', 'Sabra07G0002000' => 'sbr', 'Sabra08G0124000' => 'sbr', 'Sabra10G0032200' => 'sbr', 'Sabra11G0136000' => 'sbr', 'Sabra11G0149100' => 'sbr', 'Sabra12G0012200' => 'sbr', 'Sabra14G0002700' => 'sbr', 'Sabra14G0003500' => 'sbr', 'Sabra15G0003500' => 'sbr', 'Sabra16G0304000' => 'sbr', 'SalBow2G2614' => 'sbo', 'SalBow3G4624' => 'sbo', 'SalBow6G4719' => 'sbo', 'Sc01g0010860' => 'sci', 'Sc13g0005050' => 'sci', 'Sc13g0006000' => 'sci', 'Sc15g0001170' => 'sci', 'Sc19g0000600' => 'sci', 'Sc19g0003780' => 'sci', 'Sed0002503' => 'sed', 'Sed0004019' => 'sed', 'Sed0017163' => 'sed', 'Sed0019938' => 'sed', 'Sed0020073' => 'sed', 'Sed0021271' => 'sed', 'SEGI_06290' => 'sgi', 'SEGI_11231' => 'sgi', 'SEGI_11875' => 'sgi', 'SEGI_20704' => 'sgi', 'SEGI_22459' => 'sgi', 'SGA_v2.0_scaffold104G30185' => 'sas', 'SGA_v2.0_scaffold104G30227' => 'sas', 'SGA_v2.0_scaffold122G33258' => 'sas', 'SGA_v2.0_scaffold165G38191' => 'sas', 'SGA_v2.0_scaffold308G48106' => 'sas', 'SGA_v2.0_scaffold36G14260' => 'sas', 'SGA_v2.0_scaffold36G14262' => 'sas', 'SGA_v2.0_scaffold71G24021' => 'sas', 'SHI00597' => 'shi', 'SMO141G0087' => 'smo', 'SMO364G0840' => 'smo', 'Solyc03g081320.3' => 'sly', 'Solyc03g124060.3' => 'sly', 'Solyc06g053790.3' => 'sly', 'Solyc08g083330.2' => 'sly', 'Sopen03g022040' => 'spe', 'Sopen03g041790' => 'spe', 'Sopen06g018910' => 'spe', 'Sopen08g031540' => 'spe', 'Sp1g41570' => 'spa', 'Sp2g00010' => 'spa', 'Sp3g11220' => 'spa', 'Sp3g20760' => 'spa', 'Sp6g16230' => 'spa', 'Sp7g12580' => 'spa', 'TAR362G0659' => 'tar', 'TAR365G0534' => 'tar', 'TAR374G1276' => 'tar', 'TAR375G0446' => 'tar', 'TAR383G0471' => 'tar', 'TAR626G0132' => 'tar', 'TAR626G0219' => 'tar', 'TAR626G0755' => 'tar', 'TAR626G0832' => 'tar', 'TAR629G2596' => 'tar', 'TAR636G0772' => 'tar', 'TAR636G1136' => 'tar', 'TAR718G0001' => 'tar', 'TAR718G0006' => 'tar', 'THA.LOC104804742' => 'tha', 'THA.LOC104804749' => 'tha', 'THA.LOC104808596' => 'tha', 'THA.LOC104815704' => 'tha', 'THA.LOC104817383' => 'tha', 'THA.LOC104822743' => 'tha', 'THA.LOC104823628' => 'tha', 'Thecc.03G208300' => 'tca', 'Thecc.03G217400' => 'tca', 'Thecc.04G246300' => 'tca', 'Thecc.06G052000' => 'tca', 'Thhalv10011546m.g' => 'esa', 'Thhalv10013518m.g' => 'esa', 'Thhalv10020751m.g' => 'esa', 'Thhalv10020844m.g' => 'esa', 'Thhalv10023504m.g' => 'esa', 'Thhalv10025252m.g' => 'esa', 'TPR.G33645' => 'tpr', 'TPR.G38035' => 'tpr', 'TPR.G38747' => 'tpr', 'TPR.G39886' => 'tpr', 'TWI09G0018' => 'twi', 'TWI12G0396' => 'twi', 'TWI15G0513' => 'twi', 'TWI60G1484' => 'twi', 'TWI73G1262' => 'twi', 'TWI81G0771' => 'twi', 'unitig_21.g20904' => 'ugi', 'unitig_22.g5632' => 'ugi', 'unitig_32.g10830' => 'ugi', 'unitig_578.g16676' => 'ugi', 'unitig_8.g3582' => 'ugi', 'vmacro06439' => 'vma', 'vmacro08413' => 'vma', 'vmacro08414' => 'vma', 'vmacro11485' => 'vma', 'vmacro15408' => 'vma', 'vmacro18725' => 'vma', 'vmacro22781' => 'vma', 'VMungo0251G1891' => 'vmu', 'VMungo0331G0118' => 'vmu', 'VMungo0720G2423' => 'vmu', 'VMungo1215G3141' => 'vmu', 'VMungo1309G0109' => 'vmu', 'Zm00001eb074680' => 'zma', 'Zm00001eb082000' => 'zma', 'Zm00001eb089010' => 'zma', 'Zm00001eb208580' => 'zma', 'Zm00001eb230750' => 'zma', 'Zm00001eb240920' => 'zma', 'Zm00001eb419490' => 'zma', 'Zm00001eb429740' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000989' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000989' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000989' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000989' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000989', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '609', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p23230' => 'bna', 'A01p32010' => 'bna', 'A01p40460' => 'bna', 'A03p38020' => 'bna', 'A05p25600' => 'bna', 'A08p11150' => 'bna', 'A09p23590' => 'bna', 'A10p11490' => 'bna', 'Aa31LG10G220' => 'aar', 'Aa31LG2G1770' => 'aar', 'Aa31LG3G9840' => 'aar', 'Aa31LG8G9560' => 'aar', 'Aa31sc109G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3729' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.3861' => 'aag', 'Actinidia04477' => 'ach', 'Actinidia08696' => 'ach', 'Actinidia22220' => 'ach', 'Actinidia34267' => 'ach', 'Actinidia38817' => 'ach', 'Actinidia40085' => 'ach', 'Ah.04g154120' => 'amhyb', 'Ah.07g204670' => 'amhyb', 'Ah.08g217990' => 'amhyb', 'Ah.12g053360' => 'amhyb', 'AL1G64210' => 'aly', 'AL2G10030' => 'aly', 'AL3G24790' => 'aly', 'AL3G37520' => 'aly', 'AL7G41630' => 'aly', 'AL8G29390' => 'aly', 'Aqoxy2G03224' => 'aox', 'Aqoxy5G00318' => 'aox', 'Aqoxy5G04343' => 'aox', 'Aqoxy7G02659' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3J84P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5L1PLW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CW4TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94SB72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ECX43N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FCN3VB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JEY2CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZMQ1W' => 'arhy', 'AT1G55960' => 'ath', 'AT1G64720' => 'ath', 'AT3G13062' => 'ath', 'AT3G23080' => 'ath', 'AT4G14500' => 'ath', 'AT5G54170' => 'ath', 'ATR0582G068' => 'atr', 'ATR0619G001' => 'atr', 'ATR0626G329' => 'atr', 'ATR0665G242' => 'atr', 'ATR0849G002' => 'atr', 'ATR1155G007' => 'atr', 'Atru.chr12.2425' => 'acertr', 'Atru.chr3.4100' => 'acertr', 'Atru.chr3.4101' => 'acertr', 'Atru.chr3.4104' => 'acertr', 'Atru.chr4.2228' => 'acertr', 'Atru.chr9.1848' => 'acertr', 'AUR62001309' => 'cqu', 'AUR62006008' => 'cqu', 'AUR62007080' => 'cqu', 'AUR62019943' => 'cqu', 'AUR62025691' => 'cqu', 'AUR62035618' => 'cqu', 'AUR62040381' => 'cqu', 'AUR62041209' => 'cqu', 'BcaB01g04282' => 'bca', 'BcaB04g18227' => 'bca', 'BcaB04g20473' => 'bca', 'BcaB04g20474' => 'bca', 'BcaB04g20476' => 'bca', 'BcaB06g26432' => 'bca', 'BcaB06g26433' => 'bca', 'BcaB06g26437' => 'bca', 'BcaB07g30726' => 'bca', 'BcaB07g33179' => 'bca', 'BcaC01g04007' => 'bca', 'BcaC01g06289' => 'bca', 'BcaC01g06290' => 'bca', 'BcaC01g06292' => 'bca', 'BcaC04g21554' => 'bca', 'BcaC05g27976' => 'bca', 'BcaC07g37823' => 'bca', 'BcaC08g43665' => 'bca', 'BcaC09g49244' => 'bca', 'BcaC09g50112' => 'bca', 'BcaNung00365' => 'bca', 'BNapus_Darmor_BZH_scaffold_273p00040' => 'bna', 'BolC1t02815H' => 'bol', 'BolC1t04051H' => 'bol', 'BolC1t05148H' => 'bol', 'BolC3t16883H' => 'bol', 'BolC5t32727H' => 'bol', 'BolC6t36168H' => 'bol', 'BolC8t48210H' => 'bol', 'BolC9t55905H' => 'bol', 'BolC9t57319H' => 'bol', 'BraA01t02233Z' => 'bra', 'BraA01t03326Z' => 'bra', 'BraA03t12954Z' => 'bra', 'BraA05t21442Z' => 'bra', 'BraA08t33112Z' => 'bra', 'BraA09t37963Z' => 'bra', 'BraA10t43243Z' => 'bra', 'BraSC56t46391Z' => 'bra', 'C01p28870' => 'bna', 'C01p41010' => 'bna', 'C01p52040' => 'bna', 'C01p52050' => 'bna', 'C03p17270' => 'bna', 'C03p44490' => 'bna', 'C03p46110' => 'bna', 'C05p39820' => 'bna', 'C06p10850' => 'bna', 'C09p30420' => 'bna', 'C09p44470' => 'bna', 'CAN.G251.6' => 'can', 'CAN.G303.13' => 'can', 'CAN.G567.107' => 'can', 'CAN.G790.1' => 'can', 'CANSAT01G0659' => 'cansat', 'CANSAT21G1654' => 'cansat', 'CANSAT21G1726' => 'cansat', 'CANSAT78G0202' => 'cansat', 'CARHR045700' => 'chi', 'CARHR046180' => 'chi', 'CARHR087630' => 'chi', 'CARHR098990' => 'chi', 'CARHR220720' => 'chi', 'CARHR267380' => 'chi', 'Carub.0001s4457' => 'cru', 'Carub.0002s0001' => 'cru', 'Carub.0003s1239' => 'cru', 'Carub.0003s2325' => 'cru', 'Carub.0007s2772' => 'cru', 'Carub.0008s1448' => 'cru', 'Ca_09941_v3' => 'car', 'Ca_09957_v3' => 'car', 'Ca_16776_v3' => 'car', 'Ca_24426_v3' => 'car', 'CBR_g32388' => 'cbr', 'Cc02_g00850' => 'ccan', 'Cc03_g04870' => 'ccan', 'Cc04_g00090' => 'ccan', 'Cc04_g00100' => 'ccan', 'Cc08_g16990' => 'ccan', 'CDE01G0627' => 'cde', 'CDE02G1618' => 'cde', 'CDE04G1464' => 'cde', 'CDE05G1780' => 'cde', 'CDE05G3314' => 'cde', 'CDE06G0858' => 'cde', 'CDE06G2166' => 'cde', 'CDE07G1991' => 'cde', 'CDE09G0488' => 'cde', 'CDE12G0073' => 'cde', 'CDE12G0836' => 'cde', 'Cfa008378' => 'cfa', 'Cfa011896' => 'cfa', 'Cfa016163' => 'cfa', 'Cfa023514' => 'cfa', 'Ciclev10005003m.g' => 'ccl', 'Ciclev10020224m.g' => 'ccl', 'Ciclev10020581m.g' => 'ccl', 'Ciclev10028538m.g' => 'ccl', 'CiPaw.01G093100' => 'cil', 'CiPaw.02G116200' => 'cil', 'CiPaw.05G205000' => 'cil', 'CiPaw.11G109800' => 'cil', 'CiPaw.12G075800' => 'cil', 'ClCG01G001390' => 'cla', 'ClCG05G004590' => 'cla', 'ClCG05G012260' => 'cla', 'ClCG07G008250' => 'cla', 'COL.COLO4_10831' => 'col', 'COL.COLO4_14367' => 'col', 'COL.COLO4_15793' => 'col', 'COL.COLO4_19515' => 'col', 'COL.COLO4_22565' => 'col', 'COL.COLO4_36692' => 'col', 'Cpa.g.sc10.6' => 'cpa', 'Cpa.g.sc3.156' => 'cpa', 'Cpa.g.sc37.100' => 'cpa', 'Cpa.g.sc58.49' => 'cpa', 'Cre01.g048701' => 'cre', 'Cre03.g174850' => 'cre', 'Cre03.g198050' => 'cre', 'CsaV3_3G012570' => 'csa', 'CsaV3_3G020170' => 'csa', 'CsaV3_4G005850' => 'csa', 'CsaV3_5G001520' => 'csa', 'CSS0006754' => 'camsi', 'CSS0013054' => 'camsi', 'CSS0018458' => 'camsi', 'CSS0020273' => 'camsi', 'CSS0021808' => 'camsi', 'CSS0029916' => 'camsi', 'CSS0031702' => 'camsi', 'CSS0035105' => 'camsi', 'CSS0036335' => 'camsi', 'CSS0045851' => 'camsi', 'CSS0050465' => 'camsi', 'DCAR_002350' => 'dca', 'DCAR_005499' => 'dca', 'DCAR_006566' => 'dca', 'DCAR_007675' => 'dca', 'DCAR_007676' => 'dca', 'DCAR_014563' => 'dca', 'DCAR_020370' => 'dca', 'DCAR_027278' => 'dca', 'Dinv12897' => 'din', 'Dinv18761' => 'din', 'Dinv20318' => 'din', 'Dinv29213' => 'din', 'Dinv29909' => 'din', 'Duzib052G0107' => 'dzi', 'Duzib068G0096' => 'dzi', 'Duzib068G1164' => 'dzi', 'Duzib084G1146' => 'dzi', 'Duzib192G0753' => 'dzi', 'Duzib205G0357' => 'dzi', 'Duzib212G0433' => 'dzi', 'Duzib235G1336' => 'dzi', 'ECA232G1648' => 'eca', 'ECA232G4302' => 'eca', 'ECA233G2065' => 'eca', 'ECA240G0410' => 'eca', 'ECA240G0748' => 'eca', 'EL10Ac2g04208' => 'bvu', 'EL10Ac3g05183' => 'bvu', 'EL10Ac5g12398' => 'bvu', 'EL10Ac7g18115' => 'bvu', 'EL10As18g24158' => 'bvu', 'Eucgr.D01658' => 'egr', 'Eucgr.E01072' => 'egr', 'Eucgr.F04053' => 'egr', 'Eucgr.H03157' => 'egr', 'Eucgr.J01696' => 'egr', 'Eucgr.K00428' => 'egr', 'FAN01G2256' => 'fan', 'FAN02G1918' => 'fan', 'FAN02G4168' => 'fan', 'FAN03G0537' => 'fan', 'FAN04G2039' => 'fan', 'FAN05G4662' => 'fan', 'FAN08G0172' => 'fan', 'FAN09G3581' => 'fan', 'FAN10G0985' => 'fan', 'FAN10G2232' => 'fan', 'FAN12G0922' => 'fan', 'FAN12G1302' => 'fan', 'FAN13G2159' => 'fan', 'FAN14G2118' => 'fan', 'FAN17G2115' => 'fan', 'FAN18G2710' => 'fan', 'FAN22G1634' => 'fan', 'FvH4_4g02700' => 'fve', 'FvH4_4g22000' => 'fve', 'FvH4_5g10520' => 'fve', 'FvH4_6g36480' => 'fve', 'FvH4_7g32880' => 'fve', 'Glyma.01G234700' => 'gma', 'Glyma.04G228700' => 'gma', 'Glyma.06G136200' => 'gma', 'Glyma.07G001000' => 'gma', 'Glyma.08G226000' => 'gma', 'Glyma.10G172100' => 'gma', 'Glyma.11G008200' => 'gma', 'Glyma.20G218200' => 'gma', 'Gohir.A01G024200' => 'ghi', 'Gohir.A03G088600' => 'ghi', 'Gohir.A05G116032' => 'ghi', 'Gohir.A09G057500' => 'ghi', 'Gohir.A09G187700' => 'ghi', 'Gohir.A11G017900' => 'ghi', 'Gohir.A12G246500' => 'ghi', 'Gohir.D01G022200' => 'ghi', 'Gohir.D02G105300' => 'ghi', 'Gohir.D05G116600' => 'ghi', 'Gohir.D09G056700' => 'ghi', 'Gohir.D09G182500' => 'ghi', 'Gohir.D11G017700' => 'ghi', 'Gohir.D12G247200' => 'ghi', 'Gorai.002G024700' => 'gra', 'Gorai.005G119500' => 'gra', 'Gorai.006G070300' => 'gra', 'Gorai.006G204800' => 'gra', 'Gorai.007G018700' => 'gra', 'Gorai.008G265200' => 'gra', 'Gorai.009G120600' => 'gra', 'GSVIVG01018120001' => 'vvi', 'GSVIVG01019684001' => 'vvi', 'GSVIVG01029461001' => 'vvi', 'HanXRQChr02g0047081' => 'han', 'HanXRQChr03g0085311' => 'han', 'HanXRQChr03g0092371' => 'han', 'HanXRQChr09g0250711' => 'han', 'HanXRQChr09g0277441' => 'han', 'HanXRQChr13g0415641' => 'han', 'HanXRQChr13g0415651' => 'han', 'HanXRQChr13g0415661' => 'han', 'HanXRQChr13g0424481' => 'han', 'Haze_00294' => 'cav', 'Haze_09203' => 'cav', 'Haze_11301' => 'cav', 'Haze_11303' => 'cav', 'Haze_16237' => 'cav', 'Haze_16238' => 'cav', 'Hma1.2p1_0141F.1_g064000' => 'hma', 'Hma1.2p1_0198F.1_g085250' => 'hma', 'Hma1.2p1_0650F.1_g195430' => 'hma', 'Hma1.2p1_1193F.1_g265690' => 'hma', 'Hma1.2p1_1276F.1_g272200' => 'hma', 'HPP92_003522' => 'vpl', 'HPP92_015881' => 'vpl', 'HPP92_018325' => 'vpl', 'HPP92_020929' => 'vpl', 'HPP92_020972' => 'vpl', 'HPP92_020973' => 'vpl', 'Hund05662' => 'sun', 'Hund09711' => 'sun', 'Hund21056' => 'sun', 'Hund24920' => 'sun', 'Lalb_Chr05g0211171' => 'lal', 'Lalb_Chr06g0168581' => 'lal', 'Lalb_Chr08g0239671' => 'lal', 'Lalb_Chr09g0320041' => 'lal', 'Lalb_Chr11g0067391' => 'lal', 'Lalb_Chr21g0311511' => 'lal', 'Lalb_Chr23g0271921' => 'lal', 'Lj1g0023310' => 'lja', 'Lj2A153T86' => 'lonja', 'Lj2A153T87' => 'lonja', 'Lj3C896T1' => 'lonja', 'Lj3g0006607' => 'lja', 'Lj5A20T31' => 'lonja', 'Lj5A20T32' => 'lonja', 'Lj5g0015545' => 'lja', 'Lj6A657G46' => 'lonja', 'LjContig00222g0016598' => 'lja', 'Lsat_1_v5_gn_3_123001' => 'lsa', 'Lsat_1_v5_gn_4_106160' => 'lsa', 'Lsat_1_v5_gn_6_81481' => 'lsa', 'Lsat_1_v5_gn_8_4420' => 'lsa', 'Lsat_1_v5_gn_9_50060' => 'lsa', 'Manes.01G043000' => 'mes', 'Manes.01G054900' => 'mes', 'Manes.02G000900' => 'mes', 'Manes.03G168700' => 'mes', 'Manes.14G000100' => 'mes', 'Mapoly0020s0077' => 'mpo', 'Mapoly0154s0024' => 'mpo', 'MBI04_g22064_MAGBIO' => 'mbi', 'MBI07_g11058_MAGBIO' => 'mbi', 'MBI11_g20199_MAGBIO' => 'mbi', 'MBI11_g20200_MAGBIO' => 'mbi', 'MBI11_g20621_MAGBIO' => 'mbi', 'MBI11_g25037_MAGBIO' => 'mbi', 'MBI12_g11797_MAGBIO' => 'mbi', 'MBI15_g24506_MAGBIO' => 'mbi', 'MBI16_g00831_MAGBIO' => 'mbi', 'MCO04G365' => 'mco', 'MCO12G174' => 'mco', 'MD00G1034500' => 'mdo', 'MD06G1122300' => 'mdo', 'MD07G1298700' => 'mdo', 'MD09G1168600' => 'mdo', 'MD10G1168000' => 'mdo', 'MD13G1135100' => 'mdo', 'MD13G1207400' => 'mdo', 'MD16G1209000' => 'mdo', 'MD17G1158100' => 'mdo', 'Medtr1g078030' => 'mtr', 'Medtr3g092640' => 'mtr', 'Medtr4g005140' => 'mtr', 'Medtr5g007030' => 'mtr', 'MELO3C005798.2' => 'cme', 'MELO3C006468.2' => 'cme', 'MELO3C016366.2' => 'cme', 'MELO3C023731.2' => 'cme', 'Migut.A01071' => 'egut', 'Migut.E00722' => 'egut', 'Migut.F00991' => 'egut', 'Migut.I01212' => 'egut', 'Migut.N00240' => 'egut', 'MSTRG.11572' => 'ama', 'MSTRG.12217' => 'ama', 'MSTRG.13699' => 'ama', 'MSTRG.24701' => 'ama', 'MSTRG.24875' => 'ama', 'MSTRG.8546' => 'ama', 'Nitab4.5_0000319g0060' => 'nta', 'Nitab4.5_0000499g0090' => 'nta', 'Nitab4.5_0001418g0090' => 'nta', 'Nitab4.5_0001418g0100' => 'nta', 'Nitab4.5_0001863g0020' => 'nta', 'Nitab4.5_0002158g0190' => 'nta', 'Nitab4.5_0002520g0070' => 'nta', 'Nitab4.5_0003419g0040' => 'nta', 'Nitab4.5_0004098g0010' => 'nta', 'Nitab4.5_0005036g0010' => 'nta', 'Nitab4.5_0005040g0010' => 'nta', 'Nitab4.5_0007409g0010' => 'nta', 'Nitab4.5_0012794g0010' => 'nta', 'Nn1g00440' => 'nnu', 'Nn1g02439' => 'nnu', 'Nn1g02613' => 'nnu', 'Nn3g18800' => 'nnu', 'Nn3g19541' => 'nnu', 'Nn5g26976' => 'nnu', 'Nn8g41214' => 'nnu', 'Oeu008794.2' => 'oeu', 'Oeu015755.1' => 'oeu', 'Oeu021653.1' => 'oeu', 'Oeu035083.1' => 'oeu', 'Oeu035084.1' => 'oeu', 'Oeu042859.1' => 'oeu', 'Oeu061028.1' => 'oeu', 'Os02g0468400' => 'osa', 'Os07g0185200' => 'osa', 'Peaxi162Scf00074g00017' => 'pax', 'Peaxi162Scf00300g00827' => 'pax', 'Peaxi162Scf00325g00099' => 'pax', 'Peaxi162Scf00542g00059' => 'pax', 'Peaxi162Scf00684g00414' => 'pax', 'PGR004G2641' => 'pgr', 'PGR031G3030' => 'pgr', 'PGR042G2611' => 'pgr', 'PGR102G0324' => 'pgr', 'PGR119G2414' => 'pgr', 'PGR142G3502' => 'pgr', 'PGSC0003DMG400003208' => 'stu', 'PGSC0003DMG400009197' => 'stu', 'PGSC0003DMG400009678' => 'stu', 'PGSC0003DMG400012110' => 'stu', 'PGSC0003DMG400016320' => 'stu', 'Phvul.002G042100' => 'pvu', 'Phvul.007G117200' => 'pvu', 'Phvul.009G045400' => 'pvu', 'Phvul.010G165300' => 'pvu', 'Potri.001G450100' => 'ptr', 'Potri.007G002700' => 'ptr', 'Potri.008G162600' => 'ptr', 'Potri.010G076500' => 'ptr', 'Potri.011G151500' => 'ptr', 'Potri.012G021400' => 'ptr', 'Potri.014G001100' => 'ptr', 'Potri.015G005000' => 'ptr', 'Pp3c15_18140' => 'ppa', 'Pp3c23_14010' => 'ppa', 'Pp3c9_22010' => 'ppa', 'PRCOL_00006985' => 'pco', 'Prupe.1G030900' => 'ppe', 'Prupe.1G210200' => 'ppe', 'Prupe.2G318500' => 'ppe', 'Prupe.3G027000' => 'ppe', 'Prupe.5G133300' => 'ppe', 'Psat2g189760' => 'psa', 'Psat5g072080' => 'psa', 'Psat6g052760' => 'psa', 'PSO063G0667' => 'pso', 'PSO063G2540' => 'pso', 'PSO170G5971' => 'pso', 'PSO210G3556' => 'pso', 'PSO384G0433' => 'pso', 'PSO782G4281' => 'pso', 'PSO832G1573' => 'pso', 'QL02p027280' => 'qlo', 'QL05p085514' => 'qlo', 'QL06p015767' => 'qlo', 'QL09p007219' => 'qlo', 'QL93p0113_0031' => 'qlo', 'RcHm_v2.0_Chr1g0356291' => 'rch', 'RcHm_v2.0_Chr1g0356301' => 'rch', 'RcHm_v2.0_Chr1g0382831' => 'rch', 'RcHm_v2.0_Chr2g0148611' => 'rch', 'RcHm_v2.0_Chr4g0390521' => 'rch', 'RcHm_v2.0_Chr4g0428201' => 'rch', 'RcHm_v2.0_Chr7g0187601' => 'rch', 'Rhsim02G0033100' => 'rsi', 'Rhsim02G0253900' => 'rsi', 'Rhsim03G0215200' => 'rsi', 'Rhsim04G0190200' => 'rsi', 'Rhsim08G0251900' => 'rsi', 'Sabra05G0139700' => 'sbr', 'Sabra07G0002000' => 'sbr', 'Sabra08G0124000' => 'sbr', 'Sabra10G0032200' => 'sbr', 'Sabra11G0136000' => 'sbr', 'Sabra11G0149100' => 'sbr', 'Sabra12G0012200' => 'sbr', 'Sabra14G0002700' => 'sbr', 'Sabra14G0003500' => 'sbr', 'Sabra15G0003500' => 'sbr', 'Sabra16G0304000' => 'sbr', 'SalBow2G2614' => 'sbo', 'SalBow3G4624' => 'sbo', 'SalBow6G4719' => 'sbo', 'Sc01g0010860' => 'sci', 'Sc13g0005050' => 'sci', 'Sc13g0006000' => 'sci', 'Sc15g0001170' => 'sci', 'Sc19g0000600' => 'sci', 'Sc19g0003780' => 'sci', 'Sed0002503' => 'sed', 'Sed0004019' => 'sed', 'Sed0017163' => 'sed', 'Sed0019938' => 'sed', 'Sed0020073' => 'sed', 'Sed0021271' => 'sed', 'SEGI_06290' => 'sgi', 'SEGI_11231' => 'sgi', 'SEGI_11875' => 'sgi', 'SEGI_20704' => 'sgi', 'SEGI_22459' => 'sgi', 'SGA_v2.0_scaffold104G30185' => 'sas', 'SGA_v2.0_scaffold104G30227' => 'sas', 'SGA_v2.0_scaffold122G33258' => 'sas', 'SGA_v2.0_scaffold165G38191' => 'sas', 'SGA_v2.0_scaffold308G48106' => 'sas', 'SGA_v2.0_scaffold36G14260' => 'sas', 'SGA_v2.0_scaffold36G14262' => 'sas', 'SGA_v2.0_scaffold71G24021' => 'sas', 'SHI00597' => 'shi', 'SMO141G0087' => 'smo', 'SMO364G0840' => 'smo', 'Solyc03g081320.3' => 'sly', 'Solyc03g124060.3' => 'sly', 'Solyc06g053790.3' => 'sly', 'Solyc08g083330.2' => 'sly', 'Sopen03g022040' => 'spe', 'Sopen03g041790' => 'spe', 'Sopen06g018910' => 'spe', 'Sopen08g031540' => 'spe', 'Sp1g41570' => 'spa', 'Sp2g00010' => 'spa', 'Sp3g11220' => 'spa', 'Sp3g20760' => 'spa', 'Sp6g16230' => 'spa', 'Sp7g12580' => 'spa', 'TAR362G0659' => 'tar', 'TAR365G0534' => 'tar', 'TAR374G1276' => 'tar', 'TAR375G0446' => 'tar', 'TAR383G0471' => 'tar', 'TAR626G0132' => 'tar', 'TAR626G0219' => 'tar', 'TAR626G0755' => 'tar', 'TAR626G0832' => 'tar', 'TAR629G2596' => 'tar', 'TAR636G0772' => 'tar', 'TAR636G1136' => 'tar', 'TAR718G0001' => 'tar', 'TAR718G0006' => 'tar', 'THA.LOC104804742' => 'tha', 'THA.LOC104804749' => 'tha', 'THA.LOC104808596' => 'tha', 'THA.LOC104815704' => 'tha', 'THA.LOC104817383' => 'tha', 'THA.LOC104822743' => 'tha', 'THA.LOC104823628' => 'tha', 'Thecc.03G208300' => 'tca', 'Thecc.03G217400' => 'tca', 'Thecc.04G246300' => 'tca', 'Thecc.06G052000' => 'tca', 'Thhalv10011546m.g' => 'esa', 'Thhalv10013518m.g' => 'esa', 'Thhalv10020751m.g' => 'esa', 'Thhalv10020844m.g' => 'esa', 'Thhalv10023504m.g' => 'esa', 'Thhalv10025252m.g' => 'esa', 'TPR.G33645' => 'tpr', 'TPR.G38035' => 'tpr', 'TPR.G38747' => 'tpr', 'TPR.G39886' => 'tpr', 'TWI09G0018' => 'twi', 'TWI12G0396' => 'twi', 'TWI15G0513' => 'twi', 'TWI60G1484' => 'twi', 'TWI73G1262' => 'twi', 'TWI81G0771' => 'twi', 'unitig_21.g20904' => 'ugi', 'unitig_22.g5632' => 'ugi', 'unitig_32.g10830' => 'ugi', 'unitig_578.g16676' => 'ugi', 'unitig_8.g3582' => 'ugi', 'vmacro06439' => 'vma', 'vmacro08413' => 'vma', 'vmacro08414' => 'vma', 'vmacro11485' => 'vma', 'vmacro15408' => 'vma', 'vmacro18725' => 'vma', 'vmacro22781' => 'vma', 'VMungo0251G1891' => 'vmu', 'VMungo0331G0118' => 'vmu', 'VMungo0720G2423' => 'vmu', 'VMungo1215G3141' => 'vmu', 'VMungo1309G0109' => 'vmu', 'Zm00001eb074680' => 'zma', 'Zm00001eb082000' => 'zma', 'Zm00001eb089010' => 'zma', 'Zm00001eb208580' => 'zma', 'Zm00001eb230750' => 'zma', 'Zm00001eb240920' => 'zma', 'Zm00001eb419490' => 'zma', 'Zm00001eb429740' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000989', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000989' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000989', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '609', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000989' ) ), 'genes' => array( 'A01p23230' => 'bna', 'A01p32010' => 'bna', 'A01p40460' => 'bna', 'A03p38020' => 'bna', 'A05p25600' => 'bna', 'A08p11150' => 'bna', 'A09p23590' => 'bna', 'A10p11490' => 'bna', 'Aa31LG10G220' => 'aar', 'Aa31LG2G1770' => 'aar', 'Aa31LG3G9840' => 'aar', 'Aa31LG8G9560' => 'aar', 'Aa31sc109G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3729' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.3861' => 'aag', 'Actinidia04477' => 'ach', 'Actinidia08696' => 'ach', 'Actinidia22220' => 'ach', 'Actinidia34267' => 'ach', 'Actinidia38817' => 'ach', 'Actinidia40085' => 'ach', 'Ah.04g154120' => 'amhyb', 'Ah.07g204670' => 'amhyb', 'Ah.08g217990' => 'amhyb', 'Ah.12g053360' => 'amhyb', 'AL1G64210' => 'aly', 'AL2G10030' => 'aly', 'AL3G24790' => 'aly', 'AL3G37520' => 'aly', 'AL7G41630' => 'aly', 'AL8G29390' => 'aly', 'Aqoxy2G03224' => 'aox', 'Aqoxy5G00318' => 'aox', 'Aqoxy5G04343' => 'aox', 'Aqoxy7G02659' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3J84P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5L1PLW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CW4TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94SB72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ECX43N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FCN3VB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JEY2CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZMQ1W' => 'arhy', 'AT1G55960' => 'ath', 'AT1G64720' => 'ath', 'AT3G13062' => 'ath', 'AT3G23080' => 'ath', 'AT4G14500' => 'ath', 'AT5G54170' => 'ath', 'ATR0582G068' => 'atr', 'ATR0619G001' => 'atr', 'ATR0626G329' => 'atr', 'ATR0665G242' => 'atr', 'ATR0849G002' => 'atr', 'ATR1155G007' => 'atr', 'Atru.chr12.2425' => 'acertr', 'Atru.chr3.4100' => 'acertr', 'Atru.chr3.4101' => 'acertr', 'Atru.chr3.4104' => 'acertr', 'Atru.chr4.2228' => 'acertr', 'Atru.chr9.1848' => 'acertr', 'AUR62001309' => 'cqu', 'AUR62006008' => 'cqu', 'AUR62007080' => 'cqu', 'AUR62019943' => 'cqu', 'AUR62025691' => 'cqu', 'AUR62035618' => 'cqu', 'AUR62040381' => 'cqu', 'AUR62041209' => 'cqu', 'BcaB01g04282' => 'bca', 'BcaB04g18227' => 'bca', 'BcaB04g20473' => 'bca', 'BcaB04g20474' => 'bca', 'BcaB04g20476' => 'bca', 'BcaB06g26432' => 'bca', 'BcaB06g26433' => 'bca', 'BcaB06g26437' => 'bca', 'BcaB07g30726' => 'bca', 'BcaB07g33179' => 'bca', 'BcaC01g04007' => 'bca', 'BcaC01g06289' => 'bca', 'BcaC01g06290' => 'bca', 'BcaC01g06292' => 'bca', 'BcaC04g21554' => 'bca', 'BcaC05g27976' => 'bca', 'BcaC07g37823' => 'bca', 'BcaC08g43665' => 'bca', 'BcaC09g49244' => 'bca', 'BcaC09g50112' => 'bca', 'BcaNung00365' => 'bca', 'BNapus_Darmor_BZH_scaffold_273p00040' => 'bna', 'BolC1t02815H' => 'bol', 'BolC1t04051H' => 'bol', 'BolC1t05148H' => 'bol', 'BolC3t16883H' => 'bol', 'BolC5t32727H' => 'bol', 'BolC6t36168H' => 'bol', 'BolC8t48210H' => 'bol', 'BolC9t55905H' => 'bol', 'BolC9t57319H' => 'bol', 'BraA01t02233Z' => 'bra', 'BraA01t03326Z' => 'bra', 'BraA03t12954Z' => 'bra', 'BraA05t21442Z' => 'bra', 'BraA08t33112Z' => 'bra', 'BraA09t37963Z' => 'bra', 'BraA10t43243Z' => 'bra', 'BraSC56t46391Z' => 'bra', 'C01p28870' => 'bna', 'C01p41010' => 'bna', 'C01p52040' => 'bna', 'C01p52050' => 'bna', 'C03p17270' => 'bna', 'C03p44490' => 'bna', 'C03p46110' => 'bna', 'C05p39820' => 'bna', 'C06p10850' => 'bna', 'C09p30420' => 'bna', 'C09p44470' => 'bna', 'CAN.G251.6' => 'can', 'CAN.G303.13' => 'can', 'CAN.G567.107' => 'can', 'CAN.G790.1' => 'can', 'CANSAT01G0659' => 'cansat', 'CANSAT21G1654' => 'cansat', 'CANSAT21G1726' => 'cansat', 'CANSAT78G0202' => 'cansat', 'CARHR045700' => 'chi', 'CARHR046180' => 'chi', 'CARHR087630' => 'chi', 'CARHR098990' => 'chi', 'CARHR220720' => 'chi', 'CARHR267380' => 'chi', 'Carub.0001s4457' => 'cru', 'Carub.0002s0001' => 'cru', 'Carub.0003s1239' => 'cru', 'Carub.0003s2325' => 'cru', 'Carub.0007s2772' => 'cru', 'Carub.0008s1448' => 'cru', 'Ca_09941_v3' => 'car', 'Ca_09957_v3' => 'car', 'Ca_16776_v3' => 'car', 'Ca_24426_v3' => 'car', 'CBR_g32388' => 'cbr', 'Cc02_g00850' => 'ccan', 'Cc03_g04870' => 'ccan', 'Cc04_g00090' => 'ccan', 'Cc04_g00100' => 'ccan', 'Cc08_g16990' => 'ccan', 'CDE01G0627' => 'cde', 'CDE02G1618' => 'cde', 'CDE04G1464' => 'cde', 'CDE05G1780' => 'cde', 'CDE05G3314' => 'cde', 'CDE06G0858' => 'cde', 'CDE06G2166' => 'cde', 'CDE07G1991' => 'cde', 'CDE09G0488' => 'cde', 'CDE12G0073' => 'cde', 'CDE12G0836' => 'cde', 'Cfa008378' => 'cfa', 'Cfa011896' => 'cfa', 'Cfa016163' => 'cfa', 'Cfa023514' => 'cfa', 'Ciclev10005003m.g' => 'ccl', 'Ciclev10020224m.g' => 'ccl', 'Ciclev10020581m.g' => 'ccl', 'Ciclev10028538m.g' => 'ccl', 'CiPaw.01G093100' => 'cil', 'CiPaw.02G116200' => 'cil', 'CiPaw.05G205000' => 'cil', 'CiPaw.11G109800' => 'cil', 'CiPaw.12G075800' => 'cil', 'ClCG01G001390' => 'cla', 'ClCG05G004590' => 'cla', 'ClCG05G012260' => 'cla', 'ClCG07G008250' => 'cla', 'COL.COLO4_10831' => 'col', 'COL.COLO4_14367' => 'col', 'COL.COLO4_15793' => 'col', 'COL.COLO4_19515' => 'col', 'COL.COLO4_22565' => 'col', 'COL.COLO4_36692' => 'col', 'Cpa.g.sc10.6' => 'cpa', 'Cpa.g.sc3.156' => 'cpa', 'Cpa.g.sc37.100' => 'cpa', 'Cpa.g.sc58.49' => 'cpa', 'Cre01.g048701' => 'cre', 'Cre03.g174850' => 'cre', 'Cre03.g198050' => 'cre', 'CsaV3_3G012570' => 'csa', 'CsaV3_3G020170' => 'csa', 'CsaV3_4G005850' => 'csa', 'CsaV3_5G001520' => 'csa', 'CSS0006754' => 'camsi', 'CSS0013054' => 'camsi', 'CSS0018458' => 'camsi', 'CSS0020273' => 'camsi', 'CSS0021808' => 'camsi', 'CSS0029916' => 'camsi', 'CSS0031702' => 'camsi', 'CSS0035105' => 'camsi', 'CSS0036335' => 'camsi', 'CSS0045851' => 'camsi', 'CSS0050465' => 'camsi', 'DCAR_002350' => 'dca', 'DCAR_005499' => 'dca', 'DCAR_006566' => 'dca', 'DCAR_007675' => 'dca', 'DCAR_007676' => 'dca', 'DCAR_014563' => 'dca', 'DCAR_020370' => 'dca', 'DCAR_027278' => 'dca', 'Dinv12897' => 'din', 'Dinv18761' => 'din', 'Dinv20318' => 'din', 'Dinv29213' => 'din', 'Dinv29909' => 'din', 'Duzib052G0107' => 'dzi', 'Duzib068G0096' => 'dzi', 'Duzib068G1164' => 'dzi', 'Duzib084G1146' => 'dzi', 'Duzib192G0753' => 'dzi', 'Duzib205G0357' => 'dzi', 'Duzib212G0433' => 'dzi', 'Duzib235G1336' => 'dzi', 'ECA232G1648' => 'eca', 'ECA232G4302' => 'eca', 'ECA233G2065' => 'eca', 'ECA240G0410' => 'eca', 'ECA240G0748' => 'eca', 'EL10Ac2g04208' => 'bvu', 'EL10Ac3g05183' => 'bvu', 'EL10Ac5g12398' => 'bvu', 'EL10Ac7g18115' => 'bvu', 'EL10As18g24158' => 'bvu', 'Eucgr.D01658' => 'egr', 'Eucgr.E01072' => 'egr', 'Eucgr.F04053' => 'egr', 'Eucgr.H03157' => 'egr', 'Eucgr.J01696' => 'egr', 'Eucgr.K00428' => 'egr', 'FAN01G2256' => 'fan', 'FAN02G1918' => 'fan', 'FAN02G4168' => 'fan', 'FAN03G0537' => 'fan', 'FAN04G2039' => 'fan', 'FAN05G4662' => 'fan', 'FAN08G0172' => 'fan', 'FAN09G3581' => 'fan', 'FAN10G0985' => 'fan', 'FAN10G2232' => 'fan', 'FAN12G0922' => 'fan', 'FAN12G1302' => 'fan', 'FAN13G2159' => 'fan', 'FAN14G2118' => 'fan', 'FAN17G2115' => 'fan', 'FAN18G2710' => 'fan', 'FAN22G1634' => 'fan', 'FvH4_4g02700' => 'fve', 'FvH4_4g22000' => 'fve', 'FvH4_5g10520' => 'fve', 'FvH4_6g36480' => 'fve', 'FvH4_7g32880' => 'fve', 'Glyma.01G234700' => 'gma', 'Glyma.04G228700' => 'gma', 'Glyma.06G136200' => 'gma', 'Glyma.07G001000' => 'gma', 'Glyma.08G226000' => 'gma', 'Glyma.10G172100' => 'gma', 'Glyma.11G008200' => 'gma', 'Glyma.20G218200' => 'gma', 'Gohir.A01G024200' => 'ghi', 'Gohir.A03G088600' => 'ghi', 'Gohir.A05G116032' => 'ghi', 'Gohir.A09G057500' => 'ghi', 'Gohir.A09G187700' => 'ghi', 'Gohir.A11G017900' => 'ghi', 'Gohir.A12G246500' => 'ghi', 'Gohir.D01G022200' => 'ghi', 'Gohir.D02G105300' => 'ghi', 'Gohir.D05G116600' => 'ghi', 'Gohir.D09G056700' => 'ghi', 'Gohir.D09G182500' => 'ghi', 'Gohir.D11G017700' => 'ghi', 'Gohir.D12G247200' => 'ghi', 'Gorai.002G024700' => 'gra', 'Gorai.005G119500' => 'gra', 'Gorai.006G070300' => 'gra', 'Gorai.006G204800' => 'gra', 'Gorai.007G018700' => 'gra', 'Gorai.008G265200' => 'gra', 'Gorai.009G120600' => 'gra', 'GSVIVG01018120001' => 'vvi', 'GSVIVG01019684001' => 'vvi', 'GSVIVG01029461001' => 'vvi', 'HanXRQChr02g0047081' => 'han', 'HanXRQChr03g0085311' => 'han', 'HanXRQChr03g0092371' => 'han', 'HanXRQChr09g0250711' => 'han', 'HanXRQChr09g0277441' => 'han', 'HanXRQChr13g0415641' => 'han', 'HanXRQChr13g0415651' => 'han', 'HanXRQChr13g0415661' => 'han', 'HanXRQChr13g0424481' => 'han', 'Haze_00294' => 'cav', 'Haze_09203' => 'cav', 'Haze_11301' => 'cav', 'Haze_11303' => 'cav', 'Haze_16237' => 'cav', 'Haze_16238' => 'cav', 'Hma1.2p1_0141F.1_g064000' => 'hma', 'Hma1.2p1_0198F.1_g085250' => 'hma', 'Hma1.2p1_0650F.1_g195430' => 'hma', 'Hma1.2p1_1193F.1_g265690' => 'hma', 'Hma1.2p1_1276F.1_g272200' => 'hma', 'HPP92_003522' => 'vpl', 'HPP92_015881' => 'vpl', 'HPP92_018325' => 'vpl', 'HPP92_020929' => 'vpl', 'HPP92_020972' => 'vpl', 'HPP92_020973' => 'vpl', 'Hund05662' => 'sun', 'Hund09711' => 'sun', 'Hund21056' => 'sun', 'Hund24920' => 'sun', 'Lalb_Chr05g0211171' => 'lal', 'Lalb_Chr06g0168581' => 'lal', 'Lalb_Chr08g0239671' => 'lal', 'Lalb_Chr09g0320041' => 'lal', 'Lalb_Chr11g0067391' => 'lal', 'Lalb_Chr21g0311511' => 'lal', 'Lalb_Chr23g0271921' => 'lal', 'Lj1g0023310' => 'lja', 'Lj2A153T86' => 'lonja', 'Lj2A153T87' => 'lonja', 'Lj3C896T1' => 'lonja', 'Lj3g0006607' => 'lja', 'Lj5A20T31' => 'lonja', 'Lj5A20T32' => 'lonja', 'Lj5g0015545' => 'lja', 'Lj6A657G46' => 'lonja', 'LjContig00222g0016598' => 'lja', 'Lsat_1_v5_gn_3_123001' => 'lsa', 'Lsat_1_v5_gn_4_106160' => 'lsa', 'Lsat_1_v5_gn_6_81481' => 'lsa', 'Lsat_1_v5_gn_8_4420' => 'lsa', 'Lsat_1_v5_gn_9_50060' => 'lsa', 'Manes.01G043000' => 'mes', 'Manes.01G054900' => 'mes', 'Manes.02G000900' => 'mes', 'Manes.03G168700' => 'mes', 'Manes.14G000100' => 'mes', 'Mapoly0020s0077' => 'mpo', 'Mapoly0154s0024' => 'mpo', 'MBI04_g22064_MAGBIO' => 'mbi', 'MBI07_g11058_MAGBIO' => 'mbi', 'MBI11_g20199_MAGBIO' => 'mbi', 'MBI11_g20200_MAGBIO' => 'mbi', 'MBI11_g20621_MAGBIO' => 'mbi', 'MBI11_g25037_MAGBIO' => 'mbi', 'MBI12_g11797_MAGBIO' => 'mbi', 'MBI15_g24506_MAGBIO' => 'mbi', 'MBI16_g00831_MAGBIO' => 'mbi', 'MCO04G365' => 'mco', 'MCO12G174' => 'mco', 'MD00G1034500' => 'mdo', 'MD06G1122300' => 'mdo', 'MD07G1298700' => 'mdo', 'MD09G1168600' => 'mdo', 'MD10G1168000' => 'mdo', 'MD13G1135100' => 'mdo', 'MD13G1207400' => 'mdo', 'MD16G1209000' => 'mdo', 'MD17G1158100' => 'mdo', 'Medtr1g078030' => 'mtr', 'Medtr3g092640' => 'mtr', 'Medtr4g005140' => 'mtr', 'Medtr5g007030' => 'mtr', 'MELO3C005798.2' => 'cme', 'MELO3C006468.2' => 'cme', 'MELO3C016366.2' => 'cme', 'MELO3C023731.2' => 'cme', 'Migut.A01071' => 'egut', 'Migut.E00722' => 'egut', 'Migut.F00991' => 'egut', 'Migut.I01212' => 'egut', 'Migut.N00240' => 'egut', 'MSTRG.11572' => 'ama', 'MSTRG.12217' => 'ama', 'MSTRG.13699' => 'ama', 'MSTRG.24701' => 'ama', 'MSTRG.24875' => 'ama', 'MSTRG.8546' => 'ama', 'Nitab4.5_0000319g0060' => 'nta', 'Nitab4.5_0000499g0090' => 'nta', 'Nitab4.5_0001418g0090' => 'nta', 'Nitab4.5_0001418g0100' => 'nta', 'Nitab4.5_0001863g0020' => 'nta', 'Nitab4.5_0002158g0190' => 'nta', 'Nitab4.5_0002520g0070' => 'nta', 'Nitab4.5_0003419g0040' => 'nta', 'Nitab4.5_0004098g0010' => 'nta', 'Nitab4.5_0005036g0010' => 'nta', 'Nitab4.5_0005040g0010' => 'nta', 'Nitab4.5_0007409g0010' => 'nta', 'Nitab4.5_0012794g0010' => 'nta', 'Nn1g00440' => 'nnu', 'Nn1g02439' => 'nnu', 'Nn1g02613' => 'nnu', 'Nn3g18800' => 'nnu', 'Nn3g19541' => 'nnu', 'Nn5g26976' => 'nnu', 'Nn8g41214' => 'nnu', 'Oeu008794.2' => 'oeu', 'Oeu015755.1' => 'oeu', 'Oeu021653.1' => 'oeu', 'Oeu035083.1' => 'oeu', 'Oeu035084.1' => 'oeu', 'Oeu042859.1' => 'oeu', 'Oeu061028.1' => 'oeu', 'Os02g0468400' => 'osa', 'Os07g0185200' => 'osa', 'Peaxi162Scf00074g00017' => 'pax', 'Peaxi162Scf00300g00827' => 'pax', 'Peaxi162Scf00325g00099' => 'pax', 'Peaxi162Scf00542g00059' => 'pax', 'Peaxi162Scf00684g00414' => 'pax', 'PGR004G2641' => 'pgr', 'PGR031G3030' => 'pgr', 'PGR042G2611' => 'pgr', 'PGR102G0324' => 'pgr', 'PGR119G2414' => 'pgr', 'PGR142G3502' => 'pgr', 'PGSC0003DMG400003208' => 'stu', 'PGSC0003DMG400009197' => 'stu', 'PGSC0003DMG400009678' => 'stu', 'PGSC0003DMG400012110' => 'stu', 'PGSC0003DMG400016320' => 'stu', 'Phvul.002G042100' => 'pvu', 'Phvul.007G117200' => 'pvu', 'Phvul.009G045400' => 'pvu', 'Phvul.010G165300' => 'pvu', 'Potri.001G450100' => 'ptr', 'Potri.007G002700' => 'ptr', 'Potri.008G162600' => 'ptr', 'Potri.010G076500' => 'ptr', 'Potri.011G151500' => 'ptr', 'Potri.012G021400' => 'ptr', 'Potri.014G001100' => 'ptr', 'Potri.015G005000' => 'ptr', 'Pp3c15_18140' => 'ppa', 'Pp3c23_14010' => 'ppa', 'Pp3c9_22010' => 'ppa', 'PRCOL_00006985' => 'pco', 'Prupe.1G030900' => 'ppe', 'Prupe.1G210200' => 'ppe', 'Prupe.2G318500' => 'ppe', 'Prupe.3G027000' => 'ppe', 'Prupe.5G133300' => 'ppe', 'Psat2g189760' => 'psa', 'Psat5g072080' => 'psa', 'Psat6g052760' => 'psa', 'PSO063G0667' => 'pso', 'PSO063G2540' => 'pso', 'PSO170G5971' => 'pso', 'PSO210G3556' => 'pso', 'PSO384G0433' => 'pso', 'PSO782G4281' => 'pso', 'PSO832G1573' => 'pso', 'QL02p027280' => 'qlo', 'QL05p085514' => 'qlo', 'QL06p015767' => 'qlo', 'QL09p007219' => 'qlo', 'QL93p0113_0031' => 'qlo', 'RcHm_v2.0_Chr1g0356291' => 'rch', 'RcHm_v2.0_Chr1g0356301' => 'rch', 'RcHm_v2.0_Chr1g0382831' => 'rch', 'RcHm_v2.0_Chr2g0148611' => 'rch', 'RcHm_v2.0_Chr4g0390521' => 'rch', 'RcHm_v2.0_Chr4g0428201' => 'rch', 'RcHm_v2.0_Chr7g0187601' => 'rch', 'Rhsim02G0033100' => 'rsi', 'Rhsim02G0253900' => 'rsi', 'Rhsim03G0215200' => 'rsi', 'Rhsim04G0190200' => 'rsi', 'Rhsim08G0251900' => 'rsi', 'Sabra05G0139700' => 'sbr', 'Sabra07G0002000' => 'sbr', 'Sabra08G0124000' => 'sbr', 'Sabra10G0032200' => 'sbr', 'Sabra11G0136000' => 'sbr', 'Sabra11G0149100' => 'sbr', 'Sabra12G0012200' => 'sbr', 'Sabra14G0002700' => 'sbr', 'Sabra14G0003500' => 'sbr', 'Sabra15G0003500' => 'sbr', 'Sabra16G0304000' => 'sbr', 'SalBow2G2614' => 'sbo', 'SalBow3G4624' => 'sbo', 'SalBow6G4719' => 'sbo', 'Sc01g0010860' => 'sci', 'Sc13g0005050' => 'sci', 'Sc13g0006000' => 'sci', 'Sc15g0001170' => 'sci', 'Sc19g0000600' => 'sci', 'Sc19g0003780' => 'sci', 'Sed0002503' => 'sed', 'Sed0004019' => 'sed', 'Sed0017163' => 'sed', 'Sed0019938' => 'sed', 'Sed0020073' => 'sed', 'Sed0021271' => 'sed', 'SEGI_06290' => 'sgi', 'SEGI_11231' => 'sgi', 'SEGI_11875' => 'sgi', 'SEGI_20704' => 'sgi', 'SEGI_22459' => 'sgi', 'SGA_v2.0_scaffold104G30185' => 'sas', 'SGA_v2.0_scaffold104G30227' => 'sas', 'SGA_v2.0_scaffold122G33258' => 'sas', 'SGA_v2.0_scaffold165G38191' => 'sas', 'SGA_v2.0_scaffold308G48106' => 'sas', 'SGA_v2.0_scaffold36G14260' => 'sas', 'SGA_v2.0_scaffold36G14262' => 'sas', 'SGA_v2.0_scaffold71G24021' => 'sas', 'SHI00597' => 'shi', 'SMO141G0087' => 'smo', 'SMO364G0840' => 'smo', 'Solyc03g081320.3' => 'sly', 'Solyc03g124060.3' => 'sly', 'Solyc06g053790.3' => 'sly', 'Solyc08g083330.2' => 'sly', 'Sopen03g022040' => 'spe', 'Sopen03g041790' => 'spe', 'Sopen06g018910' => 'spe', 'Sopen08g031540' => 'spe', 'Sp1g41570' => 'spa', 'Sp2g00010' => 'spa', 'Sp3g11220' => 'spa', 'Sp3g20760' => 'spa', 'Sp6g16230' => 'spa', 'Sp7g12580' => 'spa', 'TAR362G0659' => 'tar', 'TAR365G0534' => 'tar', 'TAR374G1276' => 'tar', 'TAR375G0446' => 'tar', 'TAR383G0471' => 'tar', 'TAR626G0132' => 'tar', 'TAR626G0219' => 'tar', 'TAR626G0755' => 'tar', 'TAR626G0832' => 'tar', 'TAR629G2596' => 'tar', 'TAR636G0772' => 'tar', 'TAR636G1136' => 'tar', 'TAR718G0001' => 'tar', 'TAR718G0006' => 'tar', 'THA.LOC104804742' => 'tha', 'THA.LOC104804749' => 'tha', 'THA.LOC104808596' => 'tha', 'THA.LOC104815704' => 'tha', 'THA.LOC104817383' => 'tha', 'THA.LOC104822743' => 'tha', 'THA.LOC104823628' => 'tha', 'Thecc.03G208300' => 'tca', 'Thecc.03G217400' => 'tca', 'Thecc.04G246300' => 'tca', 'Thecc.06G052000' => 'tca', 'Thhalv10011546m.g' => 'esa', 'Thhalv10013518m.g' => 'esa', 'Thhalv10020751m.g' => 'esa', 'Thhalv10020844m.g' => 'esa', 'Thhalv10023504m.g' => 'esa', 'Thhalv10025252m.g' => 'esa', 'TPR.G33645' => 'tpr', 'TPR.G38035' => 'tpr', 'TPR.G38747' => 'tpr', 'TPR.G39886' => 'tpr', 'TWI09G0018' => 'twi', 'TWI12G0396' => 'twi', 'TWI15G0513' => 'twi', 'TWI60G1484' => 'twi', 'TWI73G1262' => 'twi', 'TWI81G0771' => 'twi', 'unitig_21.g20904' => 'ugi', 'unitig_22.g5632' => 'ugi', 'unitig_32.g10830' => 'ugi', 'unitig_578.g16676' => 'ugi', 'unitig_8.g3582' => 'ugi', 'vmacro06439' => 'vma', 'vmacro08413' => 'vma', 'vmacro08414' => 'vma', 'vmacro11485' => 'vma', 'vmacro15408' => 'vma', 'vmacro18725' => 'vma', 'vmacro22781' => 'vma', 'VMungo0251G1891' => 'vmu', 'VMungo0331G0118' => 'vmu', 'VMungo0720G2423' => 'vmu', 'VMungo1215G3141' => 'vmu', 'VMungo1309G0109' => 'vmu', 'Zm00001eb074680' => 'zma', 'Zm00001eb082000' => 'zma', 'Zm00001eb089010' => 'zma', 'Zm00001eb208580' => 'zma', 'Zm00001eb230750' => 'zma', 'Zm00001eb240920' => 'zma', 'Zm00001eb419490' => 'zma', 'Zm00001eb429740' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000989' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000989' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000989' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000989' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000989', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '609', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p23230' => 'bna', 'A01p32010' => 'bna', 'A01p40460' => 'bna', 'A03p38020' => 'bna', 'A05p25600' => 'bna', 'A08p11150' => 'bna', 'A09p23590' => 'bna', 'A10p11490' => 'bna', 'Aa31LG10G220' => 'aar', 'Aa31LG2G1770' => 'aar', 'Aa31LG3G9840' => 'aar', 'Aa31LG8G9560' => 'aar', 'Aa31sc109G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3729' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.3861' => 'aag', 'Actinidia04477' => 'ach', 'Actinidia08696' => 'ach', 'Actinidia22220' => 'ach', 'Actinidia34267' => 'ach', 'Actinidia38817' => 'ach', 'Actinidia40085' => 'ach', 'Ah.04g154120' => 'amhyb', 'Ah.07g204670' => 'amhyb', 'Ah.08g217990' => 'amhyb', 'Ah.12g053360' => 'amhyb', 'AL1G64210' => 'aly', 'AL2G10030' => 'aly', 'AL3G24790' => 'aly', 'AL3G37520' => 'aly', 'AL7G41630' => 'aly', 'AL8G29390' => 'aly', 'Aqoxy2G03224' => 'aox', 'Aqoxy5G00318' => 'aox', 'Aqoxy5G04343' => 'aox', 'Aqoxy7G02659' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3J84P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5L1PLW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CW4TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94SB72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ECX43N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FCN3VB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JEY2CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZMQ1W' => 'arhy', 'AT1G55960' => 'ath', 'AT1G64720' => 'ath', 'AT3G13062' => 'ath', 'AT3G23080' => 'ath', 'AT4G14500' => 'ath', 'AT5G54170' => 'ath', 'ATR0582G068' => 'atr', 'ATR0619G001' => 'atr', 'ATR0626G329' => 'atr', 'ATR0665G242' => 'atr', 'ATR0849G002' => 'atr', 'ATR1155G007' => 'atr', 'Atru.chr12.2425' => 'acertr', 'Atru.chr3.4100' => 'acertr', 'Atru.chr3.4101' => 'acertr', 'Atru.chr3.4104' => 'acertr', 'Atru.chr4.2228' => 'acertr', 'Atru.chr9.1848' => 'acertr', 'AUR62001309' => 'cqu', 'AUR62006008' => 'cqu', 'AUR62007080' => 'cqu', 'AUR62019943' => 'cqu', 'AUR62025691' => 'cqu', 'AUR62035618' => 'cqu', 'AUR62040381' => 'cqu', 'AUR62041209' => 'cqu', 'BcaB01g04282' => 'bca', 'BcaB04g18227' => 'bca', 'BcaB04g20473' => 'bca', 'BcaB04g20474' => 'bca', 'BcaB04g20476' => 'bca', 'BcaB06g26432' => 'bca', 'BcaB06g26433' => 'bca', 'BcaB06g26437' => 'bca', 'BcaB07g30726' => 'bca', 'BcaB07g33179' => 'bca', 'BcaC01g04007' => 'bca', 'BcaC01g06289' => 'bca', 'BcaC01g06290' => 'bca', 'BcaC01g06292' => 'bca', 'BcaC04g21554' => 'bca', 'BcaC05g27976' => 'bca', 'BcaC07g37823' => 'bca', 'BcaC08g43665' => 'bca', 'BcaC09g49244' => 'bca', 'BcaC09g50112' => 'bca', 'BcaNung00365' => 'bca', 'BNapus_Darmor_BZH_scaffold_273p00040' => 'bna', 'BolC1t02815H' => 'bol', 'BolC1t04051H' => 'bol', 'BolC1t05148H' => 'bol', 'BolC3t16883H' => 'bol', 'BolC5t32727H' => 'bol', 'BolC6t36168H' => 'bol', 'BolC8t48210H' => 'bol', 'BolC9t55905H' => 'bol', 'BolC9t57319H' => 'bol', 'BraA01t02233Z' => 'bra', 'BraA01t03326Z' => 'bra', 'BraA03t12954Z' => 'bra', 'BraA05t21442Z' => 'bra', 'BraA08t33112Z' => 'bra', 'BraA09t37963Z' => 'bra', 'BraA10t43243Z' => 'bra', 'BraSC56t46391Z' => 'bra', 'C01p28870' => 'bna', 'C01p41010' => 'bna', 'C01p52040' => 'bna', 'C01p52050' => 'bna', 'C03p17270' => 'bna', 'C03p44490' => 'bna', 'C03p46110' => 'bna', 'C05p39820' => 'bna', 'C06p10850' => 'bna', 'C09p30420' => 'bna', 'C09p44470' => 'bna', 'CAN.G251.6' => 'can', 'CAN.G303.13' => 'can', 'CAN.G567.107' => 'can', 'CAN.G790.1' => 'can', 'CANSAT01G0659' => 'cansat', 'CANSAT21G1654' => 'cansat', 'CANSAT21G1726' => 'cansat', 'CANSAT78G0202' => 'cansat', 'CARHR045700' => 'chi', 'CARHR046180' => 'chi', 'CARHR087630' => 'chi', 'CARHR098990' => 'chi', 'CARHR220720' => 'chi', 'CARHR267380' => 'chi', 'Carub.0001s4457' => 'cru', 'Carub.0002s0001' => 'cru', 'Carub.0003s1239' => 'cru', 'Carub.0003s2325' => 'cru', 'Carub.0007s2772' => 'cru', 'Carub.0008s1448' => 'cru', 'Ca_09941_v3' => 'car', 'Ca_09957_v3' => 'car', 'Ca_16776_v3' => 'car', 'Ca_24426_v3' => 'car', 'CBR_g32388' => 'cbr', 'Cc02_g00850' => 'ccan', 'Cc03_g04870' => 'ccan', 'Cc04_g00090' => 'ccan', 'Cc04_g00100' => 'ccan', 'Cc08_g16990' => 'ccan', 'CDE01G0627' => 'cde', 'CDE02G1618' => 'cde', 'CDE04G1464' => 'cde', 'CDE05G1780' => 'cde', 'CDE05G3314' => 'cde', 'CDE06G0858' => 'cde', 'CDE06G2166' => 'cde', 'CDE07G1991' => 'cde', 'CDE09G0488' => 'cde', 'CDE12G0073' => 'cde', 'CDE12G0836' => 'cde', 'Cfa008378' => 'cfa', 'Cfa011896' => 'cfa', 'Cfa016163' => 'cfa', 'Cfa023514' => 'cfa', 'Ciclev10005003m.g' => 'ccl', 'Ciclev10020224m.g' => 'ccl', 'Ciclev10020581m.g' => 'ccl', 'Ciclev10028538m.g' => 'ccl', 'CiPaw.01G093100' => 'cil', 'CiPaw.02G116200' => 'cil', 'CiPaw.05G205000' => 'cil', 'CiPaw.11G109800' => 'cil', 'CiPaw.12G075800' => 'cil', 'ClCG01G001390' => 'cla', 'ClCG05G004590' => 'cla', 'ClCG05G012260' => 'cla', 'ClCG07G008250' => 'cla', 'COL.COLO4_10831' => 'col', 'COL.COLO4_14367' => 'col', 'COL.COLO4_15793' => 'col', 'COL.COLO4_19515' => 'col', 'COL.COLO4_22565' => 'col', 'COL.COLO4_36692' => 'col', 'Cpa.g.sc10.6' => 'cpa', 'Cpa.g.sc3.156' => 'cpa', 'Cpa.g.sc37.100' => 'cpa', 'Cpa.g.sc58.49' => 'cpa', 'Cre01.g048701' => 'cre', 'Cre03.g174850' => 'cre', 'Cre03.g198050' => 'cre', 'CsaV3_3G012570' => 'csa', 'CsaV3_3G020170' => 'csa', 'CsaV3_4G005850' => 'csa', 'CsaV3_5G001520' => 'csa', 'CSS0006754' => 'camsi', 'CSS0013054' => 'camsi', 'CSS0018458' => 'camsi', 'CSS0020273' => 'camsi', 'CSS0021808' => 'camsi', 'CSS0029916' => 'camsi', 'CSS0031702' => 'camsi', 'CSS0035105' => 'camsi', 'CSS0036335' => 'camsi', 'CSS0045851' => 'camsi', 'CSS0050465' => 'camsi', 'DCAR_002350' => 'dca', 'DCAR_005499' => 'dca', 'DCAR_006566' => 'dca', 'DCAR_007675' => 'dca', 'DCAR_007676' => 'dca', 'DCAR_014563' => 'dca', 'DCAR_020370' => 'dca', 'DCAR_027278' => 'dca', 'Dinv12897' => 'din', 'Dinv18761' => 'din', 'Dinv20318' => 'din', 'Dinv29213' => 'din', 'Dinv29909' => 'din', 'Duzib052G0107' => 'dzi', 'Duzib068G0096' => 'dzi', 'Duzib068G1164' => 'dzi', 'Duzib084G1146' => 'dzi', 'Duzib192G0753' => 'dzi', 'Duzib205G0357' => 'dzi', 'Duzib212G0433' => 'dzi', 'Duzib235G1336' => 'dzi', 'ECA232G1648' => 'eca', 'ECA232G4302' => 'eca', 'ECA233G2065' => 'eca', 'ECA240G0410' => 'eca', 'ECA240G0748' => 'eca', 'EL10Ac2g04208' => 'bvu', 'EL10Ac3g05183' => 'bvu', 'EL10Ac5g12398' => 'bvu', 'EL10Ac7g18115' => 'bvu', 'EL10As18g24158' => 'bvu', 'Eucgr.D01658' => 'egr', 'Eucgr.E01072' => 'egr', 'Eucgr.F04053' => 'egr', 'Eucgr.H03157' => 'egr', 'Eucgr.J01696' => 'egr', 'Eucgr.K00428' => 'egr', 'FAN01G2256' => 'fan', 'FAN02G1918' => 'fan', 'FAN02G4168' => 'fan', 'FAN03G0537' => 'fan', 'FAN04G2039' => 'fan', 'FAN05G4662' => 'fan', 'FAN08G0172' => 'fan', 'FAN09G3581' => 'fan', 'FAN10G0985' => 'fan', 'FAN10G2232' => 'fan', 'FAN12G0922' => 'fan', 'FAN12G1302' => 'fan', 'FAN13G2159' => 'fan', 'FAN14G2118' => 'fan', 'FAN17G2115' => 'fan', 'FAN18G2710' => 'fan', 'FAN22G1634' => 'fan', 'FvH4_4g02700' => 'fve', 'FvH4_4g22000' => 'fve', 'FvH4_5g10520' => 'fve', 'FvH4_6g36480' => 'fve', 'FvH4_7g32880' => 'fve', 'Glyma.01G234700' => 'gma', 'Glyma.04G228700' => 'gma', 'Glyma.06G136200' => 'gma', 'Glyma.07G001000' => 'gma', 'Glyma.08G226000' => 'gma', 'Glyma.10G172100' => 'gma', 'Glyma.11G008200' => 'gma', 'Glyma.20G218200' => 'gma', 'Gohir.A01G024200' => 'ghi', 'Gohir.A03G088600' => 'ghi', 'Gohir.A05G116032' => 'ghi', 'Gohir.A09G057500' => 'ghi', 'Gohir.A09G187700' => 'ghi', 'Gohir.A11G017900' => 'ghi', 'Gohir.A12G246500' => 'ghi', 'Gohir.D01G022200' => 'ghi', 'Gohir.D02G105300' => 'ghi', 'Gohir.D05G116600' => 'ghi', 'Gohir.D09G056700' => 'ghi', 'Gohir.D09G182500' => 'ghi', 'Gohir.D11G017700' => 'ghi', 'Gohir.D12G247200' => 'ghi', 'Gorai.002G024700' => 'gra', 'Gorai.005G119500' => 'gra', 'Gorai.006G070300' => 'gra', 'Gorai.006G204800' => 'gra', 'Gorai.007G018700' => 'gra', 'Gorai.008G265200' => 'gra', 'Gorai.009G120600' => 'gra', 'GSVIVG01018120001' => 'vvi', 'GSVIVG01019684001' => 'vvi', 'GSVIVG01029461001' => 'vvi', 'HanXRQChr02g0047081' => 'han', 'HanXRQChr03g0085311' => 'han', 'HanXRQChr03g0092371' => 'han', 'HanXRQChr09g0250711' => 'han', 'HanXRQChr09g0277441' => 'han', 'HanXRQChr13g0415641' => 'han', 'HanXRQChr13g0415651' => 'han', 'HanXRQChr13g0415661' => 'han', 'HanXRQChr13g0424481' => 'han', 'Haze_00294' => 'cav', 'Haze_09203' => 'cav', 'Haze_11301' => 'cav', 'Haze_11303' => 'cav', 'Haze_16237' => 'cav', 'Haze_16238' => 'cav', 'Hma1.2p1_0141F.1_g064000' => 'hma', 'Hma1.2p1_0198F.1_g085250' => 'hma', 'Hma1.2p1_0650F.1_g195430' => 'hma', 'Hma1.2p1_1193F.1_g265690' => 'hma', 'Hma1.2p1_1276F.1_g272200' => 'hma', 'HPP92_003522' => 'vpl', 'HPP92_015881' => 'vpl', 'HPP92_018325' => 'vpl', 'HPP92_020929' => 'vpl', 'HPP92_020972' => 'vpl', 'HPP92_020973' => 'vpl', 'Hund05662' => 'sun', 'Hund09711' => 'sun', 'Hund21056' => 'sun', 'Hund24920' => 'sun', 'Lalb_Chr05g0211171' => 'lal', 'Lalb_Chr06g0168581' => 'lal', 'Lalb_Chr08g0239671' => 'lal', 'Lalb_Chr09g0320041' => 'lal', 'Lalb_Chr11g0067391' => 'lal', 'Lalb_Chr21g0311511' => 'lal', 'Lalb_Chr23g0271921' => 'lal', 'Lj1g0023310' => 'lja', 'Lj2A153T86' => 'lonja', 'Lj2A153T87' => 'lonja', 'Lj3C896T1' => 'lonja', 'Lj3g0006607' => 'lja', 'Lj5A20T31' => 'lonja', 'Lj5A20T32' => 'lonja', 'Lj5g0015545' => 'lja', 'Lj6A657G46' => 'lonja', 'LjContig00222g0016598' => 'lja', 'Lsat_1_v5_gn_3_123001' => 'lsa', 'Lsat_1_v5_gn_4_106160' => 'lsa', 'Lsat_1_v5_gn_6_81481' => 'lsa', 'Lsat_1_v5_gn_8_4420' => 'lsa', 'Lsat_1_v5_gn_9_50060' => 'lsa', 'Manes.01G043000' => 'mes', 'Manes.01G054900' => 'mes', 'Manes.02G000900' => 'mes', 'Manes.03G168700' => 'mes', 'Manes.14G000100' => 'mes', 'Mapoly0020s0077' => 'mpo', 'Mapoly0154s0024' => 'mpo', 'MBI04_g22064_MAGBIO' => 'mbi', 'MBI07_g11058_MAGBIO' => 'mbi', 'MBI11_g20199_MAGBIO' => 'mbi', 'MBI11_g20200_MAGBIO' => 'mbi', 'MBI11_g20621_MAGBIO' => 'mbi', 'MBI11_g25037_MAGBIO' => 'mbi', 'MBI12_g11797_MAGBIO' => 'mbi', 'MBI15_g24506_MAGBIO' => 'mbi', 'MBI16_g00831_MAGBIO' => 'mbi', 'MCO04G365' => 'mco', 'MCO12G174' => 'mco', 'MD00G1034500' => 'mdo', 'MD06G1122300' => 'mdo', 'MD07G1298700' => 'mdo', 'MD09G1168600' => 'mdo', 'MD10G1168000' => 'mdo', 'MD13G1135100' => 'mdo', 'MD13G1207400' => 'mdo', 'MD16G1209000' => 'mdo', 'MD17G1158100' => 'mdo', 'Medtr1g078030' => 'mtr', 'Medtr3g092640' => 'mtr', 'Medtr4g005140' => 'mtr', 'Medtr5g007030' => 'mtr', 'MELO3C005798.2' => 'cme', 'MELO3C006468.2' => 'cme', 'MELO3C016366.2' => 'cme', 'MELO3C023731.2' => 'cme', 'Migut.A01071' => 'egut', 'Migut.E00722' => 'egut', 'Migut.F00991' => 'egut', 'Migut.I01212' => 'egut', 'Migut.N00240' => 'egut', 'MSTRG.11572' => 'ama', 'MSTRG.12217' => 'ama', 'MSTRG.13699' => 'ama', 'MSTRG.24701' => 'ama', 'MSTRG.24875' => 'ama', 'MSTRG.8546' => 'ama', 'Nitab4.5_0000319g0060' => 'nta', 'Nitab4.5_0000499g0090' => 'nta', 'Nitab4.5_0001418g0090' => 'nta', 'Nitab4.5_0001418g0100' => 'nta', 'Nitab4.5_0001863g0020' => 'nta', 'Nitab4.5_0002158g0190' => 'nta', 'Nitab4.5_0002520g0070' => 'nta', 'Nitab4.5_0003419g0040' => 'nta', 'Nitab4.5_0004098g0010' => 'nta', 'Nitab4.5_0005036g0010' => 'nta', 'Nitab4.5_0005040g0010' => 'nta', 'Nitab4.5_0007409g0010' => 'nta', 'Nitab4.5_0012794g0010' => 'nta', 'Nn1g00440' => 'nnu', 'Nn1g02439' => 'nnu', 'Nn1g02613' => 'nnu', 'Nn3g18800' => 'nnu', 'Nn3g19541' => 'nnu', 'Nn5g26976' => 'nnu', 'Nn8g41214' => 'nnu', 'Oeu008794.2' => 'oeu', 'Oeu015755.1' => 'oeu', 'Oeu021653.1' => 'oeu', 'Oeu035083.1' => 'oeu', 'Oeu035084.1' => 'oeu', 'Oeu042859.1' => 'oeu', 'Oeu061028.1' => 'oeu', 'Os02g0468400' => 'osa', 'Os07g0185200' => 'osa', 'Peaxi162Scf00074g00017' => 'pax', 'Peaxi162Scf00300g00827' => 'pax', 'Peaxi162Scf00325g00099' => 'pax', 'Peaxi162Scf00542g00059' => 'pax', 'Peaxi162Scf00684g00414' => 'pax', 'PGR004G2641' => 'pgr', 'PGR031G3030' => 'pgr', 'PGR042G2611' => 'pgr', 'PGR102G0324' => 'pgr', 'PGR119G2414' => 'pgr', 'PGR142G3502' => 'pgr', 'PGSC0003DMG400003208' => 'stu', 'PGSC0003DMG400009197' => 'stu', 'PGSC0003DMG400009678' => 'stu', 'PGSC0003DMG400012110' => 'stu', 'PGSC0003DMG400016320' => 'stu', 'Phvul.002G042100' => 'pvu', 'Phvul.007G117200' => 'pvu', 'Phvul.009G045400' => 'pvu', 'Phvul.010G165300' => 'pvu', 'Potri.001G450100' => 'ptr', 'Potri.007G002700' => 'ptr', 'Potri.008G162600' => 'ptr', 'Potri.010G076500' => 'ptr', 'Potri.011G151500' => 'ptr', 'Potri.012G021400' => 'ptr', 'Potri.014G001100' => 'ptr', 'Potri.015G005000' => 'ptr', 'Pp3c15_18140' => 'ppa', 'Pp3c23_14010' => 'ppa', 'Pp3c9_22010' => 'ppa', 'PRCOL_00006985' => 'pco', 'Prupe.1G030900' => 'ppe', 'Prupe.1G210200' => 'ppe', 'Prupe.2G318500' => 'ppe', 'Prupe.3G027000' => 'ppe', 'Prupe.5G133300' => 'ppe', 'Psat2g189760' => 'psa', 'Psat5g072080' => 'psa', 'Psat6g052760' => 'psa', 'PSO063G0667' => 'pso', 'PSO063G2540' => 'pso', 'PSO170G5971' => 'pso', 'PSO210G3556' => 'pso', 'PSO384G0433' => 'pso', 'PSO782G4281' => 'pso', 'PSO832G1573' => 'pso', 'QL02p027280' => 'qlo', 'QL05p085514' => 'qlo', 'QL06p015767' => 'qlo', 'QL09p007219' => 'qlo', 'QL93p0113_0031' => 'qlo', 'RcHm_v2.0_Chr1g0356291' => 'rch', 'RcHm_v2.0_Chr1g0356301' => 'rch', 'RcHm_v2.0_Chr1g0382831' => 'rch', 'RcHm_v2.0_Chr2g0148611' => 'rch', 'RcHm_v2.0_Chr4g0390521' => 'rch', 'RcHm_v2.0_Chr4g0428201' => 'rch', 'RcHm_v2.0_Chr7g0187601' => 'rch', 'Rhsim02G0033100' => 'rsi', 'Rhsim02G0253900' => 'rsi', 'Rhsim03G0215200' => 'rsi', 'Rhsim04G0190200' => 'rsi', 'Rhsim08G0251900' => 'rsi', 'Sabra05G0139700' => 'sbr', 'Sabra07G0002000' => 'sbr', 'Sabra08G0124000' => 'sbr', 'Sabra10G0032200' => 'sbr', 'Sabra11G0136000' => 'sbr', 'Sabra11G0149100' => 'sbr', 'Sabra12G0012200' => 'sbr', 'Sabra14G0002700' => 'sbr', 'Sabra14G0003500' => 'sbr', 'Sabra15G0003500' => 'sbr', 'Sabra16G0304000' => 'sbr', 'SalBow2G2614' => 'sbo', 'SalBow3G4624' => 'sbo', 'SalBow6G4719' => 'sbo', 'Sc01g0010860' => 'sci', 'Sc13g0005050' => 'sci', 'Sc13g0006000' => 'sci', 'Sc15g0001170' => 'sci', 'Sc19g0000600' => 'sci', 'Sc19g0003780' => 'sci', 'Sed0002503' => 'sed', 'Sed0004019' => 'sed', 'Sed0017163' => 'sed', 'Sed0019938' => 'sed', 'Sed0020073' => 'sed', 'Sed0021271' => 'sed', 'SEGI_06290' => 'sgi', 'SEGI_11231' => 'sgi', 'SEGI_11875' => 'sgi', 'SEGI_20704' => 'sgi', 'SEGI_22459' => 'sgi', 'SGA_v2.0_scaffold104G30185' => 'sas', 'SGA_v2.0_scaffold104G30227' => 'sas', 'SGA_v2.0_scaffold122G33258' => 'sas', 'SGA_v2.0_scaffold165G38191' => 'sas', 'SGA_v2.0_scaffold308G48106' => 'sas', 'SGA_v2.0_scaffold36G14260' => 'sas', 'SGA_v2.0_scaffold36G14262' => 'sas', 'SGA_v2.0_scaffold71G24021' => 'sas', 'SHI00597' => 'shi', 'SMO141G0087' => 'smo', 'SMO364G0840' => 'smo', 'Solyc03g081320.3' => 'sly', 'Solyc03g124060.3' => 'sly', 'Solyc06g053790.3' => 'sly', 'Solyc08g083330.2' => 'sly', 'Sopen03g022040' => 'spe', 'Sopen03g041790' => 'spe', 'Sopen06g018910' => 'spe', 'Sopen08g031540' => 'spe', 'Sp1g41570' => 'spa', 'Sp2g00010' => 'spa', 'Sp3g11220' => 'spa', 'Sp3g20760' => 'spa', 'Sp6g16230' => 'spa', 'Sp7g12580' => 'spa', 'TAR362G0659' => 'tar', 'TAR365G0534' => 'tar', 'TAR374G1276' => 'tar', 'TAR375G0446' => 'tar', 'TAR383G0471' => 'tar', 'TAR626G0132' => 'tar', 'TAR626G0219' => 'tar', 'TAR626G0755' => 'tar', 'TAR626G0832' => 'tar', 'TAR629G2596' => 'tar', 'TAR636G0772' => 'tar', 'TAR636G1136' => 'tar', 'TAR718G0001' => 'tar', 'TAR718G0006' => 'tar', 'THA.LOC104804742' => 'tha', 'THA.LOC104804749' => 'tha', 'THA.LOC104808596' => 'tha', 'THA.LOC104815704' => 'tha', 'THA.LOC104817383' => 'tha', 'THA.LOC104822743' => 'tha', 'THA.LOC104823628' => 'tha', 'Thecc.03G208300' => 'tca', 'Thecc.03G217400' => 'tca', 'Thecc.04G246300' => 'tca', 'Thecc.06G052000' => 'tca', 'Thhalv10011546m.g' => 'esa', 'Thhalv10013518m.g' => 'esa', 'Thhalv10020751m.g' => 'esa', 'Thhalv10020844m.g' => 'esa', 'Thhalv10023504m.g' => 'esa', 'Thhalv10025252m.g' => 'esa', 'TPR.G33645' => 'tpr', 'TPR.G38035' => 'tpr', 'TPR.G38747' => 'tpr', 'TPR.G39886' => 'tpr', 'TWI09G0018' => 'twi', 'TWI12G0396' => 'twi', 'TWI15G0513' => 'twi', 'TWI60G1484' => 'twi', 'TWI73G1262' => 'twi', 'TWI81G0771' => 'twi', 'unitig_21.g20904' => 'ugi', 'unitig_22.g5632' => 'ugi', 'unitig_32.g10830' => 'ugi', 'unitig_578.g16676' => 'ugi', 'unitig_8.g3582' => 'ugi', 'vmacro06439' => 'vma', 'vmacro08413' => 'vma', 'vmacro08414' => 'vma', 'vmacro11485' => 'vma', 'vmacro15408' => 'vma', 'vmacro18725' => 'vma', 'vmacro22781' => 'vma', 'VMungo0251G1891' => 'vmu', 'VMungo0331G0118' => 'vmu', 'VMungo0720G2423' => 'vmu', 'VMungo1215G3141' => 'vmu', 'VMungo1309G0109' => 'vmu', 'Zm00001eb074680' => 'zma', 'Zm00001eb082000' => 'zma', 'Zm00001eb089010' => 'zma', 'Zm00001eb208580' => 'zma', 'Zm00001eb230750' => 'zma', 'Zm00001eb240920' => 'zma', 'Zm00001eb419490' => 'zma', 'Zm00001eb429740' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000989', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000989' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000989', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '609', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000989' ) ), 'genes' => array( 'A01p23230' => 'bna', 'A01p32010' => 'bna', 'A01p40460' => 'bna', 'A03p38020' => 'bna', 'A05p25600' => 'bna', 'A08p11150' => 'bna', 'A09p23590' => 'bna', 'A10p11490' => 'bna', 'Aa31LG10G220' => 'aar', 'Aa31LG2G1770' => 'aar', 'Aa31LG3G9840' => 'aar', 'Aa31LG8G9560' => 'aar', 'Aa31sc109G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3729' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.3861' => 'aag', 'Actinidia04477' => 'ach', 'Actinidia08696' => 'ach', 'Actinidia22220' => 'ach', 'Actinidia34267' => 'ach', 'Actinidia38817' => 'ach', 'Actinidia40085' => 'ach', 'Ah.04g154120' => 'amhyb', 'Ah.07g204670' => 'amhyb', 'Ah.08g217990' => 'amhyb', 'Ah.12g053360' => 'amhyb', 'AL1G64210' => 'aly', 'AL2G10030' => 'aly', 'AL3G24790' => 'aly', 'AL3G37520' => 'aly', 'AL7G41630' => 'aly', 'AL8G29390' => 'aly', 'Aqoxy2G03224' => 'aox', 'Aqoxy5G00318' => 'aox', 'Aqoxy5G04343' => 'aox', 'Aqoxy7G02659' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3J84P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5L1PLW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CW4TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.94SB72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ECX43N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FCN3VB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JEY2CC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZMQ1W' => 'arhy', 'AT1G55960' => 'ath', 'AT1G64720' => 'ath', 'AT3G13062' => 'ath', 'AT3G23080' => 'ath', 'AT4G14500' => 'ath', 'AT5G54170' => 'ath', 'ATR0582G068' => 'atr', 'ATR0619G001' => 'atr', 'ATR0626G329' => 'atr', 'ATR0665G242' => 'atr', 'ATR0849G002' => 'atr', 'ATR1155G007' => 'atr', 'Atru.chr12.2425' => 'acertr', 'Atru.chr3.4100' => 'acertr', 'Atru.chr3.4101' => 'acertr', 'Atru.chr3.4104' => 'acertr', 'Atru.chr4.2228' => 'acertr', 'Atru.chr9.1848' => 'acertr', 'AUR62001309' => 'cqu', 'AUR62006008' => 'cqu', 'AUR62007080' => 'cqu', 'AUR62019943' => 'cqu', 'AUR62025691' => 'cqu', 'AUR62035618' => 'cqu', 'AUR62040381' => 'cqu', 'AUR62041209' => 'cqu', 'BcaB01g04282' => 'bca', 'BcaB04g18227' => 'bca', 'BcaB04g20473' => 'bca', 'BcaB04g20474' => 'bca', 'BcaB04g20476' => 'bca', 'BcaB06g26432' => 'bca', 'BcaB06g26433' => 'bca', 'BcaB06g26437' => 'bca', 'BcaB07g30726' => 'bca', 'BcaB07g33179' => 'bca', 'BcaC01g04007' => 'bca', 'BcaC01g06289' => 'bca', 'BcaC01g06290' => 'bca', 'BcaC01g06292' => 'bca', 'BcaC04g21554' => 'bca', 'BcaC05g27976' => 'bca', 'BcaC07g37823' => 'bca', 'BcaC08g43665' => 'bca', 'BcaC09g49244' => 'bca', 'BcaC09g50112' => 'bca', 'BcaNung00365' => 'bca', 'BNapus_Darmor_BZH_scaffold_273p00040' => 'bna', 'BolC1t02815H' => 'bol', 'BolC1t04051H' => 'bol', 'BolC1t05148H' => 'bol', 'BolC3t16883H' => 'bol', 'BolC5t32727H' => 'bol', 'BolC6t36168H' => 'bol', 'BolC8t48210H' => 'bol', 'BolC9t55905H' => 'bol', 'BolC9t57319H' => 'bol', 'BraA01t02233Z' => 'bra', 'BraA01t03326Z' => 'bra', 'BraA03t12954Z' => 'bra', 'BraA05t21442Z' => 'bra', 'BraA08t33112Z' => 'bra', 'BraA09t37963Z' => 'bra', 'BraA10t43243Z' => 'bra', 'BraSC56t46391Z' => 'bra', 'C01p28870' => 'bna', 'C01p41010' => 'bna', 'C01p52040' => 'bna', 'C01p52050' => 'bna', 'C03p17270' => 'bna', 'C03p44490' => 'bna', 'C03p46110' => 'bna', 'C05p39820' => 'bna', 'C06p10850' => 'bna', 'C09p30420' => 'bna', 'C09p44470' => 'bna', 'CAN.G251.6' => 'can', 'CAN.G303.13' => 'can', 'CAN.G567.107' => 'can', 'CAN.G790.1' => 'can', 'CANSAT01G0659' => 'cansat', 'CANSAT21G1654' => 'cansat', 'CANSAT21G1726' => 'cansat', 'CANSAT78G0202' => 'cansat', 'CARHR045700' => 'chi', 'CARHR046180' => 'chi', 'CARHR087630' => 'chi', 'CARHR098990' => 'chi', 'CARHR220720' => 'chi', 'CARHR267380' => 'chi', 'Carub.0001s4457' => 'cru', 'Carub.0002s0001' => 'cru', 'Carub.0003s1239' => 'cru', 'Carub.0003s2325' => 'cru', 'Carub.0007s2772' => 'cru', 'Carub.0008s1448' => 'cru', 'Ca_09941_v3' => 'car', 'Ca_09957_v3' => 'car', 'Ca_16776_v3' => 'car', 'Ca_24426_v3' => 'car', 'CBR_g32388' => 'cbr', 'Cc02_g00850' => 'ccan', 'Cc03_g04870' => 'ccan', 'Cc04_g00090' => 'ccan', 'Cc04_g00100' => 'ccan', 'Cc08_g16990' => 'ccan', 'CDE01G0627' => 'cde', 'CDE02G1618' => 'cde', 'CDE04G1464' => 'cde', 'CDE05G1780' => 'cde', 'CDE05G3314' => 'cde', 'CDE06G0858' => 'cde', 'CDE06G2166' => 'cde', 'CDE07G1991' => 'cde', 'CDE09G0488' => 'cde', 'CDE12G0073' => 'cde', 'CDE12G0836' => 'cde', 'Cfa008378' => 'cfa', 'Cfa011896' => 'cfa', 'Cfa016163' => 'cfa', 'Cfa023514' => 'cfa', 'Ciclev10005003m.g' => 'ccl', 'Ciclev10020224m.g' => 'ccl', 'Ciclev10020581m.g' => 'ccl', 'Ciclev10028538m.g' => 'ccl', 'CiPaw.01G093100' => 'cil', 'CiPaw.02G116200' => 'cil', 'CiPaw.05G205000' => 'cil', 'CiPaw.11G109800' => 'cil', 'CiPaw.12G075800' => 'cil', 'ClCG01G001390' => 'cla', 'ClCG05G004590' => 'cla', 'ClCG05G012260' => 'cla', 'ClCG07G008250' => 'cla', 'COL.COLO4_10831' => 'col', 'COL.COLO4_14367' => 'col', 'COL.COLO4_15793' => 'col', 'COL.COLO4_19515' => 'col', 'COL.COLO4_22565' => 'col', 'COL.COLO4_36692' => 'col', 'Cpa.g.sc10.6' => 'cpa', 'Cpa.g.sc3.156' => 'cpa', 'Cpa.g.sc37.100' => 'cpa', 'Cpa.g.sc58.49' => 'cpa', 'Cre01.g048701' => 'cre', 'Cre03.g174850' => 'cre', 'Cre03.g198050' => 'cre', 'CsaV3_3G012570' => 'csa', 'CsaV3_3G020170' => 'csa', 'CsaV3_4G005850' => 'csa', 'CsaV3_5G001520' => 'csa', 'CSS0006754' => 'camsi', 'CSS0013054' => 'camsi', 'CSS0018458' => 'camsi', 'CSS0020273' => 'camsi', 'CSS0021808' => 'camsi', 'CSS0029916' => 'camsi', 'CSS0031702' => 'camsi', 'CSS0035105' => 'camsi', 'CSS0036335' => 'camsi', 'CSS0045851' => 'camsi', 'CSS0050465' => 'camsi', 'DCAR_002350' => 'dca', 'DCAR_005499' => 'dca', 'DCAR_006566' => 'dca', 'DCAR_007675' => 'dca', 'DCAR_007676' => 'dca', 'DCAR_014563' => 'dca', 'DCAR_020370' => 'dca', 'DCAR_027278' => 'dca', 'Dinv12897' => 'din', 'Dinv18761' => 'din', 'Dinv20318' => 'din', 'Dinv29213' => 'din', 'Dinv29909' => 'din', 'Duzib052G0107' => 'dzi', 'Duzib068G0096' => 'dzi', 'Duzib068G1164' => 'dzi', 'Duzib084G1146' => 'dzi', 'Duzib192G0753' => 'dzi', 'Duzib205G0357' => 'dzi', 'Duzib212G0433' => 'dzi', 'Duzib235G1336' => 'dzi', 'ECA232G1648' => 'eca', 'ECA232G4302' => 'eca', 'ECA233G2065' => 'eca', 'ECA240G0410' => 'eca', 'ECA240G0748' => 'eca', 'EL10Ac2g04208' => 'bvu', 'EL10Ac3g05183' => 'bvu', 'EL10Ac5g12398' => 'bvu', 'EL10Ac7g18115' => 'bvu', 'EL10As18g24158' => 'bvu', 'Eucgr.D01658' => 'egr', 'Eucgr.E01072' => 'egr', 'Eucgr.F04053' => 'egr', 'Eucgr.H03157' => 'egr', 'Eucgr.J01696' => 'egr', 'Eucgr.K00428' => 'egr', 'FAN01G2256' => 'fan', 'FAN02G1918' => 'fan', 'FAN02G4168' => 'fan', 'FAN03G0537' => 'fan', 'FAN04G2039' => 'fan', 'FAN05G4662' => 'fan', 'FAN08G0172' => 'fan', 'FAN09G3581' => 'fan', 'FAN10G0985' => 'fan', 'FAN10G2232' => 'fan', 'FAN12G0922' => 'fan', 'FAN12G1302' => 'fan', 'FAN13G2159' => 'fan', 'FAN14G2118' => 'fan', 'FAN17G2115' => 'fan', 'FAN18G2710' => 'fan', 'FAN22G1634' => 'fan', 'FvH4_4g02700' => 'fve', 'FvH4_4g22000' => 'fve', 'FvH4_5g10520' => 'fve', 'FvH4_6g36480' => 'fve', 'FvH4_7g32880' => 'fve', 'Glyma.01G234700' => 'gma', 'Glyma.04G228700' => 'gma', 'Glyma.06G136200' => 'gma', 'Glyma.07G001000' => 'gma', 'Glyma.08G226000' => 'gma', 'Glyma.10G172100' => 'gma', 'Glyma.11G008200' => 'gma', 'Glyma.20G218200' => 'gma', 'Gohir.A01G024200' => 'ghi', 'Gohir.A03G088600' => 'ghi', 'Gohir.A05G116032' => 'ghi', 'Gohir.A09G057500' => 'ghi', 'Gohir.A09G187700' => 'ghi', 'Gohir.A11G017900' => 'ghi', 'Gohir.A12G246500' => 'ghi', 'Gohir.D01G022200' => 'ghi', 'Gohir.D02G105300' => 'ghi', 'Gohir.D05G116600' => 'ghi', 'Gohir.D09G056700' => 'ghi', 'Gohir.D09G182500' => 'ghi', 'Gohir.D11G017700' => 'ghi', 'Gohir.D12G247200' => 'ghi', 'Gorai.002G024700' => 'gra', 'Gorai.005G119500' => 'gra', 'Gorai.006G070300' => 'gra', 'Gorai.006G204800' => 'gra', 'Gorai.007G018700' => 'gra', 'Gorai.008G265200' => 'gra', 'Gorai.009G120600' => 'gra', 'GSVIVG01018120001' => 'vvi', 'GSVIVG01019684001' => 'vvi', 'GSVIVG01029461001' => 'vvi', 'HanXRQChr02g0047081' => 'han', 'HanXRQChr03g0085311' => 'han', 'HanXRQChr03g0092371' => 'han', 'HanXRQChr09g0250711' => 'han', 'HanXRQChr09g0277441' => 'han', 'HanXRQChr13g0415641' => 'han', 'HanXRQChr13g0415651' => 'han', 'HanXRQChr13g0415661' => 'han', 'HanXRQChr13g0424481' => 'han', 'Haze_00294' => 'cav', 'Haze_09203' => 'cav', 'Haze_11301' => 'cav', 'Haze_11303' => 'cav', 'Haze_16237' => 'cav', 'Haze_16238' => 'cav', 'Hma1.2p1_0141F.1_g064000' => 'hma', 'Hma1.2p1_0198F.1_g085250' => 'hma', 'Hma1.2p1_0650F.1_g195430' => 'hma', 'Hma1.2p1_1193F.1_g265690' => 'hma', 'Hma1.2p1_1276F.1_g272200' => 'hma', 'HPP92_003522' => 'vpl', 'HPP92_015881' => 'vpl', 'HPP92_018325' => 'vpl', 'HPP92_020929' => 'vpl', 'HPP92_020972' => 'vpl', 'HPP92_020973' => 'vpl', 'Hund05662' => 'sun', 'Hund09711' => 'sun', 'Hund21056' => 'sun', 'Hund24920' => 'sun', 'Lalb_Chr05g0211171' => 'lal', 'Lalb_Chr06g0168581' => 'lal', 'Lalb_Chr08g0239671' => 'lal', 'Lalb_Chr09g0320041' => 'lal', 'Lalb_Chr11g0067391' => 'lal', 'Lalb_Chr21g0311511' => 'lal', 'Lalb_Chr23g0271921' => 'lal', 'Lj1g0023310' => 'lja', 'Lj2A153T86' => 'lonja', 'Lj2A153T87' => 'lonja', 'Lj3C896T1' => 'lonja', 'Lj3g0006607' => 'lja', 'Lj5A20T31' => 'lonja', 'Lj5A20T32' => 'lonja', 'Lj5g0015545' => 'lja', 'Lj6A657G46' => 'lonja', 'LjContig00222g0016598' => 'lja', 'Lsat_1_v5_gn_3_123001' => 'lsa', 'Lsat_1_v5_gn_4_106160' => 'lsa', 'Lsat_1_v5_gn_6_81481' => 'lsa', 'Lsat_1_v5_gn_8_4420' => 'lsa', 'Lsat_1_v5_gn_9_50060' => 'lsa', 'Manes.01G043000' => 'mes', 'Manes.01G054900' => 'mes', 'Manes.02G000900' => 'mes', 'Manes.03G168700' => 'mes', 'Manes.14G000100' => 'mes', 'Mapoly0020s0077' => 'mpo', 'Mapoly0154s0024' => 'mpo', 'MBI04_g22064_MAGBIO' => 'mbi', 'MBI07_g11058_MAGBIO' => 'mbi', 'MBI11_g20199_MAGBIO' => 'mbi', 'MBI11_g20200_MAGBIO' => 'mbi', 'MBI11_g20621_MAGBIO' => 'mbi', 'MBI11_g25037_MAGBIO' => 'mbi', 'MBI12_g11797_MAGBIO' => 'mbi', 'MBI15_g24506_MAGBIO' => 'mbi', 'MBI16_g00831_MAGBIO' => 'mbi', 'MCO04G365' => 'mco', 'MCO12G174' => 'mco', 'MD00G1034500' => 'mdo', 'MD06G1122300' => 'mdo', 'MD07G1298700' => 'mdo', 'MD09G1168600' => 'mdo', 'MD10G1168000' => 'mdo', 'MD13G1135100' => 'mdo', 'MD13G1207400' => 'mdo', 'MD16G1209000' => 'mdo', 'MD17G1158100' => 'mdo', 'Medtr1g078030' => 'mtr', 'Medtr3g092640' => 'mtr', 'Medtr4g005140' => 'mtr', 'Medtr5g007030' => 'mtr', 'MELO3C005798.2' => 'cme', 'MELO3C006468.2' => 'cme', 'MELO3C016366.2' => 'cme', 'MELO3C023731.2' => 'cme', 'Migut.A01071' => 'egut', 'Migut.E00722' => 'egut', 'Migut.F00991' => 'egut', 'Migut.I01212' => 'egut', 'Migut.N00240' => 'egut', 'MSTRG.11572' => 'ama', 'MSTRG.12217' => 'ama', 'MSTRG.13699' => 'ama', 'MSTRG.24701' => 'ama', 'MSTRG.24875' => 'ama', 'MSTRG.8546' => 'ama', 'Nitab4.5_0000319g0060' => 'nta', 'Nitab4.5_0000499g0090' => 'nta', 'Nitab4.5_0001418g0090' => 'nta', 'Nitab4.5_0001418g0100' => 'nta', 'Nitab4.5_0001863g0020' => 'nta', 'Nitab4.5_0002158g0190' => 'nta', 'Nitab4.5_0002520g0070' => 'nta', 'Nitab4.5_0003419g0040' => 'nta', 'Nitab4.5_0004098g0010' => 'nta', 'Nitab4.5_0005036g0010' => 'nta', 'Nitab4.5_0005040g0010' => 'nta', 'Nitab4.5_0007409g0010' => 'nta', 'Nitab4.5_0012794g0010' => 'nta', 'Nn1g00440' => 'nnu', 'Nn1g02439' => 'nnu', 'Nn1g02613' => 'nnu', 'Nn3g18800' => 'nnu', 'Nn3g19541' => 'nnu', 'Nn5g26976' => 'nnu', 'Nn8g41214' => 'nnu', 'Oeu008794.2' => 'oeu', 'Oeu015755.1' => 'oeu', 'Oeu021653.1' => 'oeu', 'Oeu035083.1' => 'oeu', 'Oeu035084.1' => 'oeu', 'Oeu042859.1' => 'oeu', 'Oeu061028.1' => 'oeu', 'Os02g0468400' => 'osa', 'Os07g0185200' => 'osa', 'Peaxi162Scf00074g00017' => 'pax', 'Peaxi162Scf00300g00827' => 'pax', 'Peaxi162Scf00325g00099' => 'pax', 'Peaxi162Scf00542g00059' => 'pax', 'Peaxi162Scf00684g00414' => 'pax', 'PGR004G2641' => 'pgr', 'PGR031G3030' => 'pgr', 'PGR042G2611' => 'pgr', 'PGR102G0324' => 'pgr', 'PGR119G2414' => 'pgr', 'PGR142G3502' => 'pgr', 'PGSC0003DMG400003208' => 'stu', 'PGSC0003DMG400009197' => 'stu', 'PGSC0003DMG400009678' => 'stu', 'PGSC0003DMG400012110' => 'stu', 'PGSC0003DMG400016320' => 'stu', 'Phvul.002G042100' => 'pvu', 'Phvul.007G117200' => 'pvu', 'Phvul.009G045400' => 'pvu', 'Phvul.010G165300' => 'pvu', 'Potri.001G450100' => 'ptr', 'Potri.007G002700' => 'ptr', 'Potri.008G162600' => 'ptr', 'Potri.010G076500' => 'ptr', 'Potri.011G151500' => 'ptr', 'Potri.012G021400' => 'ptr', 'Potri.014G001100' => 'ptr', 'Potri.015G005000' => 'ptr', 'Pp3c15_18140' => 'ppa', 'Pp3c23_14010' => 'ppa', 'Pp3c9_22010' => 'ppa', 'PRCOL_00006985' => 'pco', 'Prupe.1G030900' => 'ppe', 'Prupe.1G210200' => 'ppe', 'Prupe.2G318500' => 'ppe', 'Prupe.3G027000' => 'ppe', 'Prupe.5G133300' => 'ppe', 'Psat2g189760' => 'psa', 'Psat5g072080' => 'psa', 'Psat6g052760' => 'psa', 'PSO063G0667' => 'pso', 'PSO063G2540' => 'pso', 'PSO170G5971' => 'pso', 'PSO210G3556' => 'pso', 'PSO384G0433' => 'pso', 'PSO782G4281' => 'pso', 'PSO832G1573' => 'pso', 'QL02p027280' => 'qlo', 'QL05p085514' => 'qlo', 'QL06p015767' => 'qlo', 'QL09p007219' => 'qlo', 'QL93p0113_0031' => 'qlo', 'RcHm_v2.0_Chr1g0356291' => 'rch', 'RcHm_v2.0_Chr1g0356301' => 'rch', 'RcHm_v2.0_Chr1g0382831' => 'rch', 'RcHm_v2.0_Chr2g0148611' => 'rch', 'RcHm_v2.0_Chr4g0390521' => 'rch', 'RcHm_v2.0_Chr4g0428201' => 'rch', 'RcHm_v2.0_Chr7g0187601' => 'rch', 'Rhsim02G0033100' => 'rsi', 'Rhsim02G0253900' => 'rsi', 'Rhsim03G0215200' => 'rsi', 'Rhsim04G0190200' => 'rsi', 'Rhsim08G0251900' => 'rsi', 'Sabra05G0139700' => 'sbr', 'Sabra07G0002000' => 'sbr', 'Sabra08G0124000' => 'sbr', 'Sabra10G0032200' => 'sbr', 'Sabra11G0136000' => 'sbr', 'Sabra11G0149100' => 'sbr', 'Sabra12G0012200' => 'sbr', 'Sabra14G0002700' => 'sbr', 'Sabra14G0003500' => 'sbr', 'Sabra15G0003500' => 'sbr', 'Sabra16G0304000' => 'sbr', 'SalBow2G2614' => 'sbo', 'SalBow3G4624' => 'sbo', 'SalBow6G4719' => 'sbo', 'Sc01g0010860' => 'sci', 'Sc13g0005050' => 'sci', 'Sc13g0006000' => 'sci', 'Sc15g0001170' => 'sci', 'Sc19g0000600' => 'sci', 'Sc19g0003780' => 'sci', 'Sed0002503' => 'sed', 'Sed0004019' => 'sed', 'Sed0017163' => 'sed', 'Sed0019938' => 'sed', 'Sed0020073' => 'sed', 'Sed0021271' => 'sed', 'SEGI_06290' => 'sgi', 'SEGI_11231' => 'sgi', 'SEGI_11875' => 'sgi', 'SEGI_20704' => 'sgi', 'SEGI_22459' => 'sgi', 'SGA_v2.0_scaffold104G30185' => 'sas', 'SGA_v2.0_scaffold104G30227' => 'sas', 'SGA_v2.0_scaffold122G33258' => 'sas', 'SGA_v2.0_scaffold165G38191' => 'sas', 'SGA_v2.0_scaffold308G48106' => 'sas', 'SGA_v2.0_scaffold36G14260' => 'sas', 'SGA_v2.0_scaffold36G14262' => 'sas', 'SGA_v2.0_scaffold71G24021' => 'sas', 'SHI00597' => 'shi', 'SMO141G0087' => 'smo', 'SMO364G0840' => 'smo', 'Solyc03g081320.3' => 'sly', 'Solyc03g124060.3' => 'sly', 'Solyc06g053790.3' => 'sly', 'Solyc08g083330.2' => 'sly', 'Sopen03g022040' => 'spe', 'Sopen03g041790' => 'spe', 'Sopen06g018910' => 'spe', 'Sopen08g031540' => 'spe', 'Sp1g41570' => 'spa', 'Sp2g00010' => 'spa', 'Sp3g11220' => 'spa', 'Sp3g20760' => 'spa', 'Sp6g16230' => 'spa', 'Sp7g12580' => 'spa', 'TAR362G0659' => 'tar', 'TAR365G0534' => 'tar', 'TAR374G1276' => 'tar', 'TAR375G0446' => 'tar', 'TAR383G0471' => 'tar', 'TAR626G0132' => 'tar', 'TAR626G0219' => 'tar', 'TAR626G0755' => 'tar', 'TAR626G0832' => 'tar', 'TAR629G2596' => 'tar', 'TAR636G0772' => 'tar', 'TAR636G1136' => 'tar', 'TAR718G0001' => 'tar', 'TAR718G0006' => 'tar', 'THA.LOC104804742' => 'tha', 'THA.LOC104804749' => 'tha', 'THA.LOC104808596' => 'tha', 'THA.LOC104815704' => 'tha', 'THA.LOC104817383' => 'tha', 'THA.LOC104822743' => 'tha', 'THA.LOC104823628' => 'tha', 'Thecc.03G208300' => 'tca', 'Thecc.03G217400' => 'tca', 'Thecc.04G246300' => 'tca', 'Thecc.06G052000' => 'tca', 'Thhalv10011546m.g' => 'esa', 'Thhalv10013518m.g' => 'esa', 'Thhalv10020751m.g' => 'esa', 'Thhalv10020844m.g' => 'esa', 'Thhalv10023504m.g' => 'esa', 'Thhalv10025252m.g' => 'esa', 'TPR.G33645' => 'tpr', 'TPR.G38035' => 'tpr', 'TPR.G38747' => 'tpr', 'TPR.G39886' => 'tpr', 'TWI09G0018' => 'twi', 'TWI12G0396' => 'twi', 'TWI15G0513' => 'twi', 'TWI60G1484' => 'twi', 'TWI73G1262' => 'twi', 'TWI81G0771' => 'twi', 'unitig_21.g20904' => 'ugi', 'unitig_22.g5632' => 'ugi', 'unitig_32.g10830' => 'ugi', 'unitig_578.g16676' => 'ugi', 'unitig_8.g3582' => 'ugi', 'vmacro06439' => 'vma', 'vmacro08413' => 'vma', 'vmacro08414' => 'vma', 'vmacro11485' => 'vma', 'vmacro15408' => 'vma', 'vmacro18725' => 'vma', 'vmacro22781' => 'vma', 'VMungo0251G1891' => 'vmu', 'VMungo0331G0118' => 'vmu', 'VMungo0720G2423' => 'vmu', 'VMungo1215G3141' => 'vmu', 'VMungo1309G0109' => 'vmu', 'Zm00001eb074680' => 'zma', 'Zm00001eb082000' => 'zma', 'Zm00001eb089010' => 'zma', 'Zm00001eb208580' => 'zma', 'Zm00001eb230750' => 'zma', 'Zm00001eb240920' => 'zma', 'Zm00001eb419490' => 'zma', 'Zm00001eb429740' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000989' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000989' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000989' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000989' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151