Gene: AT5G53770

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G53770
  • Transcript Identifier AT5G53770.1
  • Gene Type Coding gene
  • Location Chr5 : 21826733-21829858 : positive

Gene Family Information

  • ID HOM05D004367
  • #Genes/#Species 164/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G53770.1
  • uniprot Q84WU1

Descriptions

  • Description Nucleotidyltransferase family protein
  • Computational description Nucleotidyltransferase family protein; FUNCTIONS IN: nucleic acid binding, nucleotidyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT4G00060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IMP
Gene OntologyrRNA processing1
GO:0031123
IBA
Gene OntologyRNA 3'-end processing2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070566
IMP
Gene Ontologyadenylyltransferase activity1
GO:0004652
IBA
Gene Ontologypolynucleotide adenylyltransferase activity2
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016779
IEA
InterPronucleotidyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0031499
IBA
Gene OntologyTRAMP complex2
GO:0005730
IBA
Gene Ontologynucleolus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043519 Nucleotidyltransferase superfamily
IPR002934 Polymerase, nucleotidyl transferase domain
IPR002058 PAP/25A-associated
Mapman id Description
16.4.1.2.5 RNA processing.RNA surveillance.exosome complex.associated co-factor activities.poly(A) RNA polymerase (TRF4)