Gene: AT5G53300

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G53300
  • Transcript Identifier AT5G53300.4
  • Gene Type Coding gene
  • Location Chr5 : 21632802-21633989 : negative

Gene Family Information

  • ID HOM05D000050
  • #Genes/#Species 4474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G53300.4
  • symbol UBC10
  • uniprot P35133

Descriptions

  • Description ubiquitin-conjugating enzyme 10
  • Computational description ubiquitin-conjugating enzyme 10 (UBC10); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 9 (TAIR:AT4G27960.1); Has 10679 Blast hits to 10640 proteins in 402 species: Archae - 0; Bacteria - 4; Metazoa - 4642; Fungi - 2339; Plants - 1932; Viruses - 26; Other Eukaryotes - 1736 (source: NCBI BLink).
  • Computational description ubiquitin-conjugating enzyme 10 (UBC10); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 9 (TAIR:AT4G27960.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IDA
IBA
TAS
Gene Ontologyubiquitin-dependent protein catabolic process1 2 3
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination3
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity2
GO:0031625
IPI
Gene Ontologyubiquitin protein ligase binding4
GO:0061631
IEA
GOA Databaseubiquitin conjugating enzyme activity
GO:0061631
IBA
Gene Ontologyubiquitin conjugating enzyme activity3
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR000608 Ubiquitin-conjugating enzyme E2
Mapman id Description
19.2.2.5.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.MUB conjugation.conjugation E2 protein