Gene: AT5G52560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G52560
  • Transcript Identifier AT5G52560.1
  • Gene Type Coding gene
  • Location Chr5 : 21331230-21334573 : positive

Gene Family Information

  • ID HOM05D004195
  • #Genes/#Species 169/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G52560.1
  • symbol USP
  • Alias ATUSP,UDP-sugar pyrophosphorylase
  • uniprot Q9C5I1

Descriptions

  • Description UDP-sugar pyrophosphorylase
  • Computational description UDP-sugar pyrophosphorylase (USP); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
IEP
GOA Databaseresponse to cadmium ion
GO:0006048
IBA
Gene OntologyUDP-N-acetylglucosamine biosynthetic process1
GO:0009226
IMP
Gene Ontologynucleotide-sugar biosynthetic process2
GO:0033356
IMP
Gene OntologyUDP-L-arabinose metabolic process3
GO:0009555
IMP
Gene Ontologypollen development3
GO:0052573
IDA
Gene OntologyUDP-D-galactose metabolic process4
GO:0046398
IDA
Gene OntologyUDP-glucuronate metabolic process4
GO:0006011
IDA
Gene OntologyUDP-glucose metabolic process4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0047350
IDA
Gene Ontologyglucuronate-1-phosphate uridylyltransferase activity3
GO:0070569
IEA
GOA Databaseuridylyltransferase activity
GO:0070569
IEA
InterProuridylyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0051748
IEA
GOA DatabaseUTP-monosaccharide-1-phosphate uridylyltransferase activity
GO:0051748
ISS
Gene OntologyUTP-monosaccharide-1-phosphate uridylyltransferase activity5
GO:0003977
IBA
Gene OntologyUDP-N-acetylglucosamine diphosphorylase activity1
GO:0047338
IDA
Gene OntologyUTP:xylose-1-phosphate uridylyltransferase activity3
GO:0017103
IDA
Gene OntologyUTP:galactose-1-phosphate uridylyltransferase activity3
GO:0010491
IDA
Gene OntologyUTP:arabinose-1-phosphate uridylyltransferase activity3
GO:0003983
IDA
Gene OntologyUTP:glucose-1-phosphate uridylyltransferase activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
Gene Ontologycytosol6
GO:0090406
IDA
Gene Ontologypollen tube3
GO:0005634
ISM
Gene Ontologynucleus
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002618 UDPGP family
IPR029044 Nucleotide-diphospho-sugar transferases
IPR039741 UDP-sugar pyrophosphorylase
Mapman id Description
3.13.3.2.3 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid biosynthesis.myo-inositol oxidation pathway (MIOP).multifunctional UDP-monosaccharide pyrophosphorylase