Gene: AT5G49010

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G49010
  • Transcript Identifier AT5G49010.1
  • Gene Type Coding gene
  • Location Chr5 : 19866464-19868074 : positive

Gene Family Information

  • ID HOM05D004725
  • #Genes/#Species 155/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G49010.1
  • symbol SLD5
  • Alias EMB2812,EMBRYO DEFECTIVE 2812
  • full_name SYNTHETIC LETHALITY WITH DPB11-1 5
  • uniprot Q6NQP5

Descriptions

  • Description DNA replication protein-like protein
  • Computational description SYNTHETIC LETHALITY WITH DPB11-1 5 (SLD5); CONTAINS InterPro DOMAIN/s: GINS complex (InterPro:IPR021151), GINS complex, subunit Sld5 (InterPro:IPR008591); Has 338 Blast hits to 337 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 117; Fungi - 122; Plants - 54; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006261
IEA
Gene OntologyDNA-dependent DNA replication
GO:0006261
IEA
InterProDNA-dependent DNA replication
GO:0006270
TAS
Gene OntologyDNA replication initiation1
GO:0000727
IBA
Gene Ontologydouble-strand break repair via break-induced replication2
GO:0006260
IEA
GOA DatabaseDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0000811
ISS, IBA
Gene OntologyGINS complex1 2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021151 GINS subunit, domain A
IPR031633 DNA replication complex GINS protein SLD5, C-terminal
IPR008591 GINS complex subunit Sld5
IPR038749 GINS complex protein Sld5, alpha-helical domain
IPR036224 GINS, helical bundle-like domain superfamily
Mapman id Description
13.2.2.5.4 Cell cycle organisation.DNA replication.initiation.GINS DNA replication fork maintenance complex.component SLD5