Gene: AT5G47870
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G47870
- Transcript Identifier AT5G47870.1
- Gene Type Coding gene
- Location Chr5 : 19384555-19385808 : negative
Gene Family Information
- ID HOM05D002859
- #Genes/#Species 242/93
- Phylogenetic origin
- ID ORTHO05D003120
- #Genes/#Species 243/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G47870.1
- symbol RAD52-2
- Alias ODB2,Organellar DNA-Binding protein 2,RAD52-2B
- full_name radiation sensitive 51-2
- uniprot Q9FIJ4
Descriptions
- Description cobalt ion-binding protein
- Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000724 | IEA | GOA Database | double-strand break repair via homologous recombination | |
| GO:0000724 | IMP | Gene Ontology | double-strand break repair via homologous recombination | 1 |
| GO:0000724 | IEA | InterPro | double-strand break repair via homologous recombination | |
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006310 | IEA | GOA Database | DNA recombination | |
| GO:0006974 | IEA | GOA Database | cellular response to DNA damage stimulus |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | IDA, HDA ISM | Gene Ontology | chloroplast | 1 2 |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009536 | HDA | Gene Ontology | plastid | 3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR037489 | DNA repair RAD52-like protein |
| Mapman id | Description |
|---|---|
| 13.5.7.2 | Cell cycle organisation.organellar DNA replication.DNA recombination.recombination mediator (RAD52) |