Gene: AT5G42240

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G42240
  • Transcript Identifier AT5G42240.1
  • Gene Type Coding gene
  • Location Chr5 : 16888717-16890931 : positive

Gene Family Information

  • ID HOM05D000058
  • #Genes/#Species 4266/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G42240.1
  • symbol scpl42
  • uniprot Q9FH05

Descriptions

  • Description serine carboxypeptidase-like 42
  • Computational description serine carboxypeptidase-like 42 (scpl42); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 41 (TAIR:AT5G42230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004185
IEA
GOA Databaseserine-type carboxypeptidase activity
GO:0004185
IBA
Gene Ontologyserine-type carboxypeptidase activity1
GO:0004185
IEA
InterProserine-type carboxypeptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004180
IEA
GOA Databasecarboxypeptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005618
IDA
GOA Databasecell wall
GO:0005618
HDA
Gene Ontologycell wall2
GO:0005773
IBA
Gene Ontologyvacuole1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029058 Alpha/Beta hydrolase fold
IPR001563 Peptidase S10, serine carboxypeptidase
Mapman id Description
19.4.2.2 Protein homeostasis.proteolysis.serine-type peptidase activities.S10-class serine carboxypeptidase (SCPL)