Gene: AT5G40470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G40470
  • Transcript Identifier AT5G40470.1
  • Gene Type Coding gene
  • Location Chr5 : 16208255-16209745 : negative

Gene Family Information

  • ID HOM05D004871
  • #Genes/#Species 152/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G40470.1
  • uniprot Q9FI63

Descriptions

  • Description RNI-like superfamily protein
  • Computational description RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 2544 Blast hits to 1647 proteins in 181 species: Archae - 0; Bacteria - 22; Metazoa - 1074; Fungi - 251; Plants - 934; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031146
IBA
Gene OntologySCF-dependent proteasomal ubiquitin-dependent protein catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D004871

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0019005
IBA
Gene OntologySCF ubiquitin ligase complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006553 Leucine-rich repeat, cysteine-containing subtype
IPR032675 Leucine-rich repeat domain superfamily
Mapman id Description
35.1 not assigned.annotated