Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G40470 Arabidopsis thaliana HOM05D004871 ORTHO05D005755 2.3e-274 948.3 497 100.0
AL7G49360 Arabidopsis lyrata HOM05D004871 ORTHO05D005755 1.8e-242 842.4 503 88.5
Carub.0007s3511 Capsella rubella HOM05D004871 ORTHO05D005755 1.4e-207 726.5 506 78.9
CARHR261520 Cardamine hirsuta HOM05D004871 ORTHO05D005755 1.2e-190 670.2 498 73.9
Thhalv10028043m.g Eutrema salsugineum HOM05D004871 ORTHO05D005755 1.7e-184 649.8 497 71.2
BraA04t17009Z Brassica rapa HOM05D004871 ORTHO05D005755 1.5e-180 636.7 496 70.8
Sp7g01440 Schrenkiella parvula HOM05D004871 ORTHO05D005755 4.0e-178 628.6 499 69.9
C04p47280 Brassica napus HOM05D004871 ORTHO05D005755 4.7e-171 605.1 496 68.3
BolC4t26328H Brassica oleracea HOM05D004871 ORTHO05D005755 4.7e-171 605.1 496 68.3
A04p13500 Brassica napus HOM05D004871 ORTHO05D005755 2.0e-169 599.7 496 68.3
BcaB06g27513 Brassica carinata HOM05D004871 ORTHO05D005755 2.2e-144 516.5 495 61.6
Aa31LG9G1150 Aethionema arabicum HOM05D004871 ORTHO05D005755 5.3e-138 495.4 513 57.1
THA.LOC104825322 Tarenaya hassleriana HOM05D004871 ORTHO05D005755 1.2e-118 431.0 497 51.9
COL.COLO4_29115 Corchorus olitorius HOM05D004871 ORTHO05D005755 6.5e-112 408.7 500 48.6
Thecc.04G017200 Theobroma cacao HOM05D004871 ORTHO05D005755 2.1e-110 403.7 482 50.0
CiPaw.03G043700 Carya illinoinensis HOM05D004871 ORTHO05D005755 1.4e-109 401.0 502 47.2
Ciclev10015079m.g Citrus clementina HOM05D004871 ORTHO05D005755 2.0e-108 397.1 504 46.2
Duzib147G1217 Durio zibethinus HOM05D004871 ORTHO05D005755 4.4e-108 396.0 497 48.1
Atru.chr6.2393 Acer truncatum HOM05D004871 ORTHO05D005755 5.7e-108 395.6 504 47.4
Potri.017G069800 Populus trichocarpa HOM05D004871 ORTHO05D005755 2.8e-107 393.3 504 46.8
Manes.15G150700 Manihot esculenta HOM05D004871 ORTHO05D005755 1.8e-106 390.6 499 47.1
Gohir.A05G355800 Gossypium hirsutum HOM05D004871 ORTHO05D005755 5.3e-106 389.0 495 46.3
Hma1.2p1_2120F.1_g314420 Hydrangea macrophylla HOM05D004871 ORTHO05D005755 1.2e-105 387.9 495 47.5
MD17G1027100 Malus domestica HOM05D004871 ORTHO05D005755 4.5e-105 386.0 499 45.7
Gorai.001G265000 Gossypium raimondii HOM05D004871 ORTHO05D005755 2.2e-104 383.6 495 46.3
Gohir.D07G229900 Gossypium hirsutum HOM05D004871 ORTHO05D005755 2.5e-103 380.2 495 45.7
Cpa.g.sc130.82 Carica papaya HOM05D004871 ORTHO05D005755 1.2e-102 377.9 501 46.9
RcHm_v2.0_Chr2g0172801 Rosa chinensis HOM05D004871 ORTHO05D005755 1.6e-102 377.5 497 45.5
TWI12G0316 Tripterygium wilfordii HOM05D004871 ORTHO05D005755 4.7e-102 375.9 498 47.4
Gohir.D04G057500 Gossypium hirsutum HOM05D004871 ORTHO05D005755 3.9e-101 372.9 495 44.0
Gorai.012G064200 Gossypium raimondii HOM05D004871 ORTHO05D005755 3.9e-101 372.9 495 44.4
Prupe.3G291600 Prunus persica HOM05D004871 ORTHO05D005755 3.7e-99 366.3 500 46.0
Haze_14739 Corylus avellana HOM05D004871 ORTHO05D005755 1.1e-98 364.8 497 46.1
QL02p074723 Quercus lobata HOM05D004871 ORTHO05D005755 1.1e-98 364.8 502 46.0
CANSAT64G1143 Cannabis sativa HOM05D004871 ORTHO05D005755 3.1e-98 363.2 499 45.3
Nn3g16731 Nelumbo nucifera HOM05D004871 ORTHO05D005755 5.3e-98 362.5 509 45.4
Nn3g16736 Nelumbo nucifera HOM05D004871 ORTHO05D005755 5.3e-98 362.5 509 45.4
Cfa007369 Carpinus fangiana HOM05D004871 ORTHO05D005755 1.2e-97 361.3 498 46.0
ClCG10G013890 Citrullus lanatus HOM05D004871 ORTHO05D005755 1.3e-96 357.8 501 44.7
PGR083G0754 Punica granatum HOM05D004871 ORTHO05D005755 2.2e-96 357.1 501 44.1
CiPaw.04G028400 Carya illinoinensis HOM05D004871 ORTHO05D005755 6.5e-96 355.5 501 44.3
MD09G1027100 Malus domestica HOM05D004871 ORTHO05D005755 1.9e-95 354.0 494 44.1
Sabra17G0062100 Salix brachista HOM05D004871 ORTHO05D005755 2.5e-95 353.6 505 45.7
Peaxi162Scf00129g00168 Petunia axillaris HOM05D004871 ORTHO05D005755 9.4e-95 351.7 495 44.2
Sopen02g031150 Solanum pennellii HOM05D004871 ORTHO05D005755 3.6e-94 349.7 498 44.8
PGSC0003DMG400012633 Solanum tuberosum HOM05D004871 ORTHO05D005755 1.4e-93 347.8 497 43.9
Lj1g0007322 Lotus japonicus HOM05D004871 ORTHO05D005755 5.2e-93 345.9 502 43.8
CsaV3_3G042800 Cucumis sativus L. HOM05D004871 ORTHO05D005755 1.2e-92 344.7 501 42.9
Lju41C42T3 Lonicera japonica HOM05D004871 ORTHO05D005755 4.4e-92 342.8 519 44.7
Eucgr.J02242 Eucalyptus grandis HOM05D004871 ORTHO05D005755 5.7e-92 342.4 500 43.0
FAN14G1702 Fragaria x ananassa HOM05D004871 ORTHO05D005755 6.3e-91 339.0 436 46.8
FAN02G2556 Fragaria x ananassa HOM05D004871 ORTHO05D005755 8.2e-91 338.6 433 47.1
MELO3C026581.2 Cucumis melo HOM05D004871 ORTHO05D005755 1.1e-90 338.2 499 42.1
CAN.G473.11 Capsicum annuum HOM05D004871 ORTHO05D005755 5.3e-90 335.9 499 42.9
Cc07_g01680 Coffea canephora HOM05D004871 ORTHO05D005755 7.0e-90 335.5 495 42.6
FvH4_6g51200 Fragaria vesca HOM05D004871 ORTHO05D005755 7.0e-90 335.5 433 46.9
Migut.H00077 Erythranthe guttata HOM05D004871 ORTHO05D005755 7.7e-89 332.0 505 42.2
Oeu054623.1 Olea europaea HOM05D004871 ORTHO05D005755 2.2e-88 330.5 500 44.0
Medtr7g033720 Medicago truncatula HOM05D004871 ORTHO05D005755 3.8e-88 329.7 497 43.3
Ca_23007_v3 Cicer arietinum L. HOM05D004871 ORTHO05D005755 5.0e-88 329.3 500 43.4
CSS0032397 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 8.5e-88 328.6 483 44.1
Sed0007166 Sechium edule HOM05D004871 ORTHO05D005755 8.5e-88 328.6 497 41.2
MSTRG.24039 Avicennia marina HOM05D004871 ORTHO05D005755 5.5e-87 325.9 480 42.9
Phvul.008G154600 Phaseolus vulgaris HOM05D004871 ORTHO05D005755 7.2e-87 325.5 494 42.3
DCAR_021722 Daucus carota HOM05D004871 ORTHO05D005755 6.1e-86 322.4 495 40.6
SGA_v2.0_scaffold18G08277 Striga asiatica HOM05D004871 ORTHO05D005755 1.0e-85 321.6 504 41.7
Lj7C599T13 Lonicera japonica HOM05D004871 ORTHO05D005755 6.8e-85 318.9 504 42.3
Lalb_Chr14g0362771 Lupinus albus HOM05D004871 ORTHO05D005755 8.8e-85 318.5 498 41.2
Lalb_Chr24g0402861 Lupinus albus HOM05D004871 ORTHO05D005755 1.7e-83 314.3 502 40.8
Eucgr.H01852 Eucalyptus grandis HOM05D004871 ORTHO05D005755 2.8e-83 313.5 500 41.6
TAR622G0125 Trochodendron aralioides HOM05D004871 ORTHO05D005755 2.7e-81 307.0 457 42.5
Glyma.19G068600 Glycine max HOM05D004871 ORTHO05D005755 7.7e-81 305.4 498 42.0
SalBow1G4779 Salvia bowleyana HOM05D004871 ORTHO05D005755 1.3e-80 304.7 497 39.0
Sc16g0004350 Simmondsia chinensis HOM05D004871 ORTHO05D005755 1.7e-80 304.3 502 40.4
Oeu018139.1 Olea europaea HOM05D004871 ORTHO05D005755 1.5e-79 301.2 499 40.5
PSO832G2649 Papaver somniferum HOM05D004871 ORTHO05D005755 8.0e-78 295.4 511 38.7
Rhsim08G0050600 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.4e-77 294.7 515 39.8
SalBow2G2412 Salvia bowleyana HOM05D004871 ORTHO05D005755 2.3e-77 293.9 499 38.7
vmacro18283 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 5.2e-77 292.7 496 38.9
TAR371G0422 Trochodendron aralioides HOM05D004871 ORTHO05D005755 8.8e-77 292.0 496 39.3
vmacro23390 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.5e-76 291.2 496 38.7
Dinv35106 Davidia involucrata HOM05D004871 ORTHO05D005755 2.0e-76 290.8 496 40.9
Eucgr.L00043 Eucalyptus grandis HOM05D004871 ORTHO05D005755 2.6e-76 290.4 499 38.1
Lsat_1_v5_gn_0_47681 Lactuca sativa HOM05D004871 ORTHO05D005755 9.8e-76 288.5 498 39.0
Peaxi162Scf00129g01652 Petunia axillaris HOM05D004871 ORTHO05D005755 1.3e-75 288.1 420 43.1
PSO063G1038 Papaver somniferum HOM05D004871 ORTHO05D005755 2.2e-75 287.3 508 38.6
HanXRQChr17g0548491 Helianthus annuus HOM05D004871 ORTHO05D005755 3.7e-75 286.6 496 39.3
Nitab4.5_0003318g0120 Nicotiana tabacum HOM05D004871 ORTHO05D005755 3.7e-75 286.6 331 47.4
TAR371G1027 Trochodendron aralioides HOM05D004871 ORTHO05D005755 4.9e-75 286.2 503 39.6
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 1.8e-74 284.3 292 50.7
Nitab4.5_0002468g0010 Nicotiana tabacum HOM05D004871 ORTHO05D005755 2.4e-74 283.9 331 46.8
Atru.chr6.2392 Acer truncatum HOM05D004871 ORTHO05D005755 3.1e-74 283.5 295 50.5
Rhsim08G0049600 Rhododendron simsii HOM05D004871 ORTHO05D005755 4.1e-74 283.1 502 41.6
CDE08G0710 Ceratophyllum demersum HOM05D004871 ORTHO05D005755 7.0e-74 282.3 468 40.8
FAN05G1656 Fragaria x ananassa HOM05D004871 ORTHO05D005755 3.5e-73 280.0 391 44.8
Gohir.A07G223200 Gossypium hirsutum HOM05D004871 ORTHO05D005755 4.5e-73 279.6 495 38.2
Rhsim08G0049400 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.9e-73 279.3 453 42.4
Aqoxy5G03783 Aquilegia oxysepala HOM05D004871 ORTHO05D005755 1.3e-72 278.1 508 38.2
TAR371G0152 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.7e-72 277.7 491 39.1
Rhsim08G0050100 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.8e-70 270.4 495 38.8
Rhsim08G0048900 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.8e-69 267.7 493 38.9
vmacro23391 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 8.9e-69 265.4 494 37.9
Rhsim08G0049300 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.7e-68 262.7 504 37.7
Glyma.16G071200 Glycine max HOM05D004871 ORTHO05D005755 9.8e-68 261.9 494 37.9
ATR0686G244 Amborella trichopoda HOM05D004871 ORTHO05D005755 2.7e-65 253.8 493 36.9
HPP92_009906 Vanilla planifolia HOM05D004871 ORTHO05D005755 3.5e-65 253.4 517 38.9
HanXRQChr15g0475301 Helianthus annuus HOM05D004871 ORTHO05D005755 3.9e-64 250.0 496 34.9
TAR633G0371 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.1e-63 248.4 338 42.3
Psat3g166880 Pisum sativum HOM05D004871 ORTHO05D005755 5.6e-63 246.1 292 45.2
Rhsim08G0050400 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.6e-62 243.4 481 39.9
Rhsim08G0050500 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.8e-61 241.1 504 38.1
Rhsim08G0050200 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.6e-60 237.3 430 40.0
unitig_899.g14805 Utricularia gibba HOM05D004871 ORTHO05D005755 2.6e-60 237.3 430 39.3
GSVIVG01032408001 Vitis vinifera HOM05D004871 ORTHO05D005755 4.4e-60 236.5 233 51.5
Rhsim08G0049200 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.9e-58 231.1 292 43.2
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.6e-57 228.0 312 43.6
Zm00001eb246170 Zea mays HOM05D004871 ORTHO05D005755 1.6e-57 228.0 501 33.9
VMungo1383G0924 Vigna mungo HOM05D004871 ORTHO05D005755 1.0e-56 225.3 276 46.4
vmacro18285 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.3e-56 224.2 499 36.5
vmacro23392 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.3e-56 224.2 499 36.5
SMO298G0062 Selaginella moellendorffii HOM05D004871 ORTHO05D005755 8.6e-56 222.2 489 34.8
vmacro18284 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 5.2e-53 213.0 355 37.7
FAN09G0732 Fragaria x ananassa HOM05D000795 ORTHO05D005755 4.9e-51 206.5 187 55.1
Rhsim08G0049900 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.3e-47 193.7 494 32.6
Actinidia35771 Actinidia chinensis HOM05D004871 ORTHO05D005755 8.1e-46 189.1 346 39.0
Peaxi162Scf00129g01633 Petunia axillaris HOM05D004871 ORTHO05D005755 2.3e-45 187.6 206 48.1
Rhsim08G0050000 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.2e-44 185.3 493 31.6
Nn1g05920 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.4e-42 178.3 269 44.2
BcaB07g32983 Brassica carinata HOM05D004871 ORTHO05D005755 1.9e-42 177.9 126 72.2
Cc00_g26710 Coffea canephora HOM05D004871 ORTHO05D005755 9.2e-42 175.6 310 39.7
Rhsim08G0050300 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.9e-40 170.2 244 43.0
TAR371G0343 Trochodendron aralioides HOM05D004871 ORTHO05D005755 4.3e-39 166.8 193 47.7
TAR374G1232 Trochodendron aralioides HOM05D004871 ORTHO05D005755 5.6e-31 139.8 156 50.6
TPR.G1076 Trifolium pratense HOM05D004871 ORTHO05D005755 2.4e-29 134.4 431 30.6
TAR629G3424 Trochodendron aralioides HOM05D004871 ORTHO05D005755 3.1e-29 134.0 239 36.4
ATR0589G064 Amborella trichopoda HOM05D004871 ORTHO05D005755 2.0e-28 131.3 342 34.8
FAN27G1866 Fragaria x ananassa HOM05D004871 ORTHO05D005755 4.2e-26 123.6 158 41.8
CSS0034270 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 1.3e-24 118.6 168 42.3
FAN09G0037 Fragaria x ananassa HOM05D004871 ORTHO05D005755 2.3e-24 117.9 150 44.0
FAN05G3698 Fragaria x ananassa HOM05D004871 ORTHO05D005755 4.3e-23 113.6 102 56.9
ATR0762G040 Amborella trichopoda HOM05D004871 ORTHO05D005755 7.4e-23 112.8 304 33.2
Solyc02g086440.4 Solanum lycopersicum HOM05D004871 ORTHO05D005755 4.5e-20 103.6 223 39.5
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 9.9e-20 102.4 109 47.7
HanXRQChr07g0188231 Helianthus annuus HOM05D004871 ORTHO05D005755 1.7e-19 101.7 147 39.5
FAN05G3297 Fragaria x ananassa HOM05D004871 ORTHO05D005755 8.4e-19 99.4 144 40.3
CSS0039002 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 2.1e-17 94.7 87 55.2
Nitab4.5_0007441g0020 Nicotiana tabacum HOM05D004871 ORTHO05D005755 1.8e-16 91.7 78 53.8
CSS0033026 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 6.5e-11 73.2 72 51.4
TAR314G0001 Trochodendron aralioides HOM05D004871 ORTHO05D005755 8.4e-11 72.8 125 37.6
FAN14G0631 Fragaria x ananassa HOM05D004871 ORTHO05D005755 9.3e-10 69.3 74 50.0
Eucgr.K02937 Eucalyptus grandis HOM05D002125 ORTHO05D002105 7.9e-09 66.2 250 26.8
HPP92_021034 Vanilla planifolia HOM05D002503 ORTHO05D002810 1.3e-08 65.5 413 25.4
Glyma.12G006500 Glycine max HOM05D002503 ORTHO05D002810 6.7e-08 63.2 475 23.8
TPR.G16396 Trifolium pratense HOM05D001219 ORTHO05D001017 6.7e-08 63.2 422 21.1
Sc21g0004980 Simmondsia chinensis HOM05D002125 ORTHO05D002105 2.5e-07 61.2 199 27.6
BraA03t09402Z Brassica rapa HOM05D002125 ORTHO05D002105 4.3e-07 60.5 202 31.7
Medtr5g075860 Medicago truncatula HOM05D001219 ORTHO05D001017 4.3e-07 60.5 335 22.1
Medtr6g025290 Medicago truncatula HOM05D001219 ORTHO05D001017 4.3e-07 60.5 237 24.1
Sabra06G0111300 Salix brachista HOM05D003317 ORTHO05D003696 4.3e-07 60.5 197 28.9
TPR.G37654 Trifolium pratense HOM05D001219 ORTHO05D001017 4.3e-07 60.5 261 21.8
Nn2g12227 Nelumbo nucifera HOM05D001993 ORTHO05D009037 7.4e-07 59.7 209 30.1
Lalb_Chr01g0012921 Lupinus albus HOM05D001219 ORTHO05D001017 2.2e-06 58.2 331 20.8
Potri.006G142200 Populus trichocarpa HOM05D003317 ORTHO05D003696 2.2e-06 58.2 201 27.4
Atru.chr7.1699 Acer truncatum HOM05D003317 ORTHO05D003696 2.8e-06 57.8 223 29.1
Nitab4.5_0002594g0070 Nicotiana tabacum HOM05D002762 ORTHO05D004643 2.8e-06 57.8 301 26.9
Haze_26007 Corylus avellana HOM05D003317 ORTHO05D003696 3.7e-06 57.4 292 25.0
vmacro12363 Vaccinium macrocarpon HOM05D001219 ORTHO05D001017 4.8e-06 57.0 250 22.8
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 6.3e-06 56.6 198 32.3
CsaV3_1G040990 Cucumis sativus L. HOM05D003317 ORTHO05D003696 6.3e-06 56.6 230 25.2
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 8.2e-06 56.2 182 26.9
Medtr4g125440 Medicago truncatula HOM05D003317 ORTHO05D003696 8.2e-06 56.2 194 26.8


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