Gene: AT5G40300

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G40300
  • Transcript Identifier AT5G40300.1
  • Gene Type Coding gene
  • Location Chr5 : 16110778-16112701 : positive

Gene Family Information

  • ID HOM05D001228
  • #Genes/#Species 505/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G40300.1
  • Alias CASPL4A1,CASP-like protein 4A1
  • uniprot Q9FNE8

Descriptions

  • Description Uncharacterized protein family (UPF0497)
  • Computational description Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G36330.1); Has 212 Blast hits to 212 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051539
IBA
Gene Ontology4 iron, 4 sulfur cluster binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005886
IDA
IEA
GOA Databaseplasma membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006702 Casparian strip membrane protein domain
Mapman id Description
35.1 not assigned.annotated