Gene: AT5G40160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G40160
  • Transcript Identifier AT5G40160.1
  • Gene Type Coding gene
  • Location Chr5 : 16062726-16064301 : negative

Gene Family Information

  • ID HOM05D007469
  • #Genes/#Species 102/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G40160.1
  • symbol EMB506
  • Alias EMB139,EMBRYO DEFECTIVE 139
  • full_name embryo defective 506
  • uniprot Q9SQK3

Descriptions

  • Description Ankyrin repeat family protein
  • Computational description embryo defective 506 (EMB506); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 90387 Blast hits to 29284 proteins in 1374 species: Archae - 134; Bacteria - 8440; Metazoa - 46466; Fungi - 7182; Plants - 3258; Viruses - 1346; Other Eukaryotes - 23561 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002110 Ankyrin repeat
IPR020683 Ankyrin repeat-containing domain
IPR036770 Ankyrin repeat-containing domain superfamily
Mapman id Description
35.1 not assigned.annotated