Gene: AT5G39960

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G39960
  • Transcript Identifier AT5G39960.1
  • Gene Type Coding gene
  • Location Chr5 : 15994195-15996820 : positive

Gene Family Information

  • ID HOM05D002474
  • #Genes/#Species 274/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G39960.1
  • Alias EngA-2
  • uniprot F4KFX1

Descriptions

  • Description GTP-binding protein
  • Computational description GTP binding;GTP binding; FUNCTIONS IN: GTP binding; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding, EngA (InterPro:IPR016484), Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), Guanylate kinase (InterPro:IPR008144), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G12080.1); Has 25797 Blast hits to 22413 proteins in 2944 species: Archae - 203; Bacteria - 19262; Metazoa - 305; Fungi - 220; Plants - 200; Viruses - 0; Other Eukaryotes - 5607 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000027
IBA
Gene Ontologyribosomal large subunit assembly1
GO:0042254
IEA
GOA Databaseribosome biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043022
IBA
Gene Ontologyribosome binding1
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
Gene Ontologymitochondrion2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006073 GTP binding domain
IPR015946 K homology domain-like, alpha/beta
IPR005225 Small GTP-binding protein domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR032859 GTPase Der, C-terminal KH-domain-like
IPR016484 GTP-binding protein EngA
Mapman id Description
35.1 not assigned.annotated