Gene: AT5G39680
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G39680
- Transcript Identifier AT5G39680.1
- Gene Type Coding gene
- Location Chr5 : 15884236-15886368 : negative
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D000003
- #Genes/#Species 15137/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G39680.1
- symbol EMB2744
- full_name EMBRYO DEFECTIVE 2744
- uniprot Q9FK93
Descriptions
- Description Pentatricopeptide repeat (PPR) superfamily protein
- Computational description EMBRYO DEFECTIVE 2744 (EMB2744); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1); Has 37711 Blast hits to 13427 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 23; Plants - 37282; Viruses - 0; Other Eukaryotes - 369 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009793 | NAS | Gene Ontology | embryo development ending in seed dormancy |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | Gene Ontology | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |