Gene: AT5G39670

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G39670
  • Transcript Identifier AT5G39670.1
  • Gene Type Coding gene
  • Location Chr5 : 15883270-15883884 : positive

Gene Family Information

  • ID HOM05D002107
  • #Genes/#Species 317/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G39670.1
  • uniprot Q93Z27

Descriptions

  • Description Calcium-binding EF-hand family protein
  • Computational description Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G29000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900425
IMP, IGI
Gene Ontologynegative regulation of defense response to bacterium1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0005509
IEA
GOA Databasecalcium ion binding
GO:0005509
IBA
Gene Ontologycalcium ion binding3
GO:0005509
IEA
InterProcalcium ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005575
ND
Gene Ontologycellular_component

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002048 EF-hand domain
IPR011992 EF-hand domain pair
Mapman id Description
27.7.2 Multi-process regulation.calcium-dependent signalling.calcium sensor (CML)