Gene: AT5G39540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G39540
  • Transcript Identifier AT5G39540.1
  • Gene Type Coding gene
  • Location Chr5 : 15833743-15834420 : negative

Gene Family Information

  • ID HOM05D000171
  • #Genes/#Species 2192/38
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G39540.1
  • uniprot F4KEG7

Descriptions

  • Description F-box associated ubiquitination effector family protein
  • Computational description F-box associated ubiquitination effector family protein; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 3 (InterPro:IPR013187); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 63 (TAIR:AT3G55210.1); Has 141 Blast hits to 139 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000171

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017451 F-box associated interaction domain
IPR013187 F-box associated domain, type 3
Mapman id Description
35.1 not assigned.annotated