Gene: AT5G39520

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G39520
  • Transcript Identifier AT5G39520.1
  • Gene Type Coding gene
  • Location Chr5 : 15823920-15825416 : negative

Gene Family Information

  • ID HOM05D004214
  • #Genes/#Species 168/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G39520.1
  • uniprot Q0WW43

Descriptions

  • Description hypothetical protein (DUF1997)
  • Computational description Protein of unknown function (DUF1997); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT5G39530.1); Has 157 Blast hits to 157 proteins in 60 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
IMP
Gene Ontologyresponse to abscisic acid1
GO:0010150
IMP
Gene Ontologyleaf senescence1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0009507
IDA
Gene Ontologychloroplast1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018971 Protein of unknown function DUF1997
Mapman id Description
35.2 not assigned.not annotate