Gene: AT5G38120

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G38120
  • Transcript Identifier AT5G38120.1
  • Gene Type Coding gene
  • Location Chr5 : 15213773-15216137 : positive

Gene Family Information

  • ID HOM05D000169
  • #Genes/#Species 2209/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G38120.1
  • symbol 4CL8
  • uniprot Q84P26

Descriptions

  • Description AMP-dependent synthetase and ligase family protein
  • Computational description AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G20500.1); Has 83515 Blast hits to 76136 proteins in 3676 species: Archae - 1169; Bacteria - 53948; Metazoa - 3493; Fungi - 4649; Plants - 2738; Viruses - 1; Other Eukaryotes - 17517 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006744
IMP
Gene Ontologyubiquinone biosynthetic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016207
ISS
Gene Ontology4-coumarate-CoA ligase activity
GO:0016405
IMP
IBA
Gene OntologyCoA-ligase activity1 2
GO:0016874
IEA
GOA Databaseligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005777
IEA
GOA Databaseperoxisome
GO:0005777
IDA
IBA
Gene Ontologyperoxisome1 2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025110 AMP-binding enzyme, C-terminal domain
IPR000873 AMP-dependent synthetase/ligase
IPR042099 ANL, N-terminal domain
Mapman id Description
11.7.1.7 Phytohormone action.jasmonic acid.biosynthesis.OPC-8:CoA synthetase (ACS)