Gene: AT5G28640
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G28640
- Transcript Identifier AT5G28640.1
- Gene Type Coding gene
- Location Chr5 : 10647831-10649620 : negative
Gene Family Information
- ID HOM05D001494
- #Genes/#Species 424/98
- Phylogenetic origin
- ID ORTHO05D001364
- #Genes/#Species 423/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G28640.1
- symbol AN3
- Alias ATGIF1,ARABIDOPSIS GRF1-INTERACTING FACTOR 1,GIF1,GRF1-INTERACTING FACTOR 1,GIF,GRF1-INTERACTING FACTOR
- full_name ANGUSTIFOLIA 3
- uniprot Q8L8A5
Descriptions
- Description SSXT family protein
- Computational description ANGUSTIFOLIA 3 (AN3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 1752 Blast hits to 1579 proteins in 197 species: Archae - 0; Bacteria - 58; Metazoa - 1009; Fungi - 145; Plants - 200; Viruses - 1; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010468 | IPI | Gene Ontology | regulation of gene expression | 1 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | Os03g0733600 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | Zm00001eb056300 |
| GO:0010582 | ISO | PLAZA Integrative Orthology | floral meristem determinacy | Zm00001eb056300 |
| GO:0045944 | IBA | Gene Ontology | positive regulation of transcription by RNA polymerase II | 2 |
| GO:0048366 | IMP IBA | Gene Ontology | leaf development | 2 3 |
| GO:0008283 | IBA | Gene Ontology | cell population proliferation | 2 |
| GO:0048825 | IMP | Gene Ontology | cotyledon development | 4 |
| GO:0009955 | IMP | Gene Ontology | adaxial/abaxial pattern specification | 5 |
| GO:0051301 | IMP | Gene Ontology | cell division | 6 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003713 | ISS IEA | Gene Ontology | transcription coactivator activity | 7 |
| GO:0003713 | IEA | InterPro | transcription coactivator activity | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | Os03g0733600 |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.4.1.2.1 | Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.BAF-type modules.component AN3/GIF |
| 15.5.50.2 | RNA biosynthesis.transcriptional regulation.GRF-GIF transcription factor complex.cofactor component GIF |