Gene: AT5G28590
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G28590
- Transcript Identifier AT5G28590.1
- Gene Type Coding gene
- Location Chr5 : 10579446-10581559 : negative
Gene Family Information
- ID HOM05D000236
- #Genes/#Species 1775/97
- Phylogenetic origin
- ID ORTHO05D005787
- #Genes/#Species 152/80
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G28590.1
- uniprot F4K8J6
Descriptions
- Description DNA-binding family protein
- Computational description DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT3G04590.2); Has 713 Blast hits to 708 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 711; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003680 | IEA | GOA Database | minor groove of adenine-thymine-rich DNA binding | |
| GO:0003680 | IEA | InterPro | minor groove of adenine-thymine-rich DNA binding | |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005575 | ND | Gene Ontology | cellular_component | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |