Gene: AT5G27840

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G27840
  • Transcript Identifier AT5G27840.1
  • Gene Type Coding gene
  • Location Chr5 : 9863311-9864828 : negative

Gene Family Information

  • ID HOM05D000115
  • #Genes/#Species 2905/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G27840.1
  • symbol TOPP8
  • uniprot O82734

Descriptions

  • Description Calcineurin-like metallo-phosphoesterase superfamily protein
  • Computational description TOPP8; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT3G05580.1); Has 7305 Blast hits to 7120 proteins in 684 species: Archae - 78; Bacteria - 668; Metazoa - 2406; Fungi - 1414; Plants - 989; Viruses - 10; Other Eukaryotes - 1740 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006470
IEA
GOA Databaseprotein dephosphorylation
GO:0006470
ISS
Gene Ontologyprotein dephosphorylation1
GO:0048768
IGI
Gene Ontologyroot hair cell tip growth2
GO:0009860
IGI
Gene Ontologypollen tube growth2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IEA
InterProhydrolase activity
GO:0004721
IEA
GOA Databasephosphoprotein phosphatase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004722
IEA
GOA Databaseprotein serine/threonine phosphatase activity
GO:0004722
IDA, IMP
ISS, IBA
Gene Ontologyprotein serine/threonine phosphatase activity1 2 3 4
GO:0106307
IEA
Gene Ontologyprotein threonine phosphatase activity
GO:0106306
IEA
Gene Ontologyprotein serine phosphatase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
IBA
Gene Ontologynucleus2 4
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM, IBA
Gene Ontologycytoplasm4
GO:0005829
IDA
Gene Ontologycytosol2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031675 Serine-threonine protein phosphatase, N-terminal
IPR004843 Calcineurin-like phosphoesterase domain, ApaH type
IPR029052 Metallo-dependent phosphatase-like
IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
Mapman id Description
18.4.25.1.1 Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP1-class phosphatase