Gene: AT5G26667
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G26667
- Transcript Identifier AT5G26667.2
- Gene Type Coding gene
- Location Chr5 : 9276659-9278091 : positive
Gene Family Information
- ID HOM05D001737
- #Genes/#Species 373/100
- Phylogenetic origin
- ID ORTHO05D001735
- #Genes/#Species 362/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G26667.2
- symbol PYR6
- uniprot O04905
Descriptions
- Description P-loop containing nucleoside triphosphate hydrolases superfamily protein
- Computational description PYR6; FUNCTIONS IN: uridylate kinase activity, cytidylate kinase activity; INVOLVED IN: pyrimidine ribonucleoside monophosphate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G60180.1); Has 14045 Blast hits to 13848 proteins in 4925 species: Archae - 109; Bacteria - 9053; Metazoa - 1251; Fungi - 483; Plants - 459; Viruses - 0; Other Eukaryotes - 2690 (source: NCBI BLink).
- Computational description PYR6; FUNCTIONS IN: uridylate kinase activity, cytidylate kinase activity; INVOLVED IN: pyrimidine ribonucleoside monophosphate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G60180.1); Has 14054 Blast hits to 13857 proteins in 4925 species: Archae - 109; Bacteria - 9053; Metazoa - 1253; Fungi - 483; Plants - 467; Viruses - 0; Other Eukaryotes - 2689 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006139 | IEA | GOA Database | nucleobase-containing compound metabolic process | |
GO:0006139 | IEA | InterPro | nucleobase-containing compound metabolic process | |
GO:0016310 | IEA | GOA Database | phosphorylation | |
GO:0006207 | IEA | Gene Ontology | 'de novo' pyrimidine nucleobase biosynthetic process | |
GO:0006207 | IEA | InterPro | 'de novo' pyrimidine nucleobase biosynthetic process | |
GO:0006221 | IEA | GOA Database | pyrimidine nucleotide biosynthetic process | |
GO:0006221 | IDA | Gene Ontology | pyrimidine nucleotide biosynthetic process | 1 |
GO:0006221 | IEA | InterPro | pyrimidine nucleotide biosynthetic process | |
GO:0006225 | IBA | Gene Ontology | UDP biosynthetic process | 2 |
GO:0009173 | TAS | Gene Ontology | pyrimidine ribonucleoside monophosphate metabolic process | 1 |
GO:0046705 | IBA | Gene Ontology | CDP biosynthetic process | 2 |
GO:0046940 | IEA | GOA Database | nucleoside monophosphate phosphorylation |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0036430 | IEA | GOA Database | CMP kinase activity | |
GO:0036431 | IEA | GOA Database | dCMP kinase activity | |
GO:0033862 | IEA | GOA Database | UMP kinase activity | |
GO:0033862 | IBA | Gene Ontology | UMP kinase activity | 2 |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0016740 | IEA | GOA Database | transferase activity | |
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IDA | Gene Ontology | ATP binding | 1 |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0016301 | IEA | GOA Database | kinase activity | |
GO:0019205 | IEA | GOA Database | nucleobase-containing compound kinase activity | |
GO:0019205 | IEA | InterPro | nucleobase-containing compound kinase activity | |
GO:0004127 | IEA | GOA Database | cytidylate kinase activity | |
GO:0004127 | IDA IBA | Gene Ontology | cytidylate kinase activity | 1 2 |
GO:0004127 | IEA | InterPro | cytidylate kinase activity | |
GO:0009041 | IEA | GOA Database | uridylate kinase activity | |
GO:0009041 | IDA | Gene Ontology | uridylate kinase activity | 1 |
GO:0009041 | IEA | InterPro | uridylate kinase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | IDA | GOA Database | cytosol | |
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IBA | Gene Ontology | nucleus | 2 |
GO:0009536 | HDA | Gene Ontology | plastid | 3 |
GO:0005737 | IEA | GOA Database | cytoplasm | |
GO:0005737 | ISM, IBA | Gene Ontology | cytoplasm | 2 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
6.2.3.1 | Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase |