Gene: AT5G25754

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G25754
  • Transcript Identifier AT5G25754.1
  • Gene Type Coding gene
  • Location Chr5 : 8953564-8955511 : positive

Gene Family Information

  • ID HOM05D004668
  • #Genes/#Species 156/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G25754.1
  • uniprot A0A178U9L8

Descriptions

  • Description RNA polymerase I-associated factor PAF67
  • Computational description RNA polymerase I-associated factor PAF67; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: RNA polymerase I-associated factor PAF67 (InterPro:IPR019382); BEST Arabidopsis thaliana protein match is: RNA polymerase I-associated factor PAF67 (TAIR:AT5G25757.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001732
IEA
GOA Databaseformation of cytoplasmic translation initiation complex
GO:0006413
IEA
GOA Databasetranslational initiation
GO:0006412
IEA
GOA Databasetranslation
GO:0002183
IEA
GOA Databasecytoplasmic translational initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003743
IEA
GOA Databasetranslation initiation factor activity
GO:0003743
IEA
InterProtranslation initiation factor activity
GO:0003729
HDA
Gene OntologymRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G25757
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G25757
GO:0005852
IEA
GOA Databaseeukaryotic translation initiation factor 3 complex
GO:0005852
IEA
InterProeukaryotic translation initiation factor 3 complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005634
ISM
Gene Ontologynucleus
GO:0016282
IEA
GOA Databaseeukaryotic 43S preinitiation complex
GO:0033290
IEA
GOA Databaseeukaryotic 48S preinitiation complex
GO:0009536
HDA
Gene Ontologyplastid2
GO:0009506
HDA
Gene Ontologyplasmodesma3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019382 Translation initiation factor 3 complex subunit L
Mapman id Description
17.4.1.3.12 Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF3 mRNA-to-PIC binding complex.component eIF3l