Gene: AT5G25640

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G25640
  • Transcript Identifier AT5G25640.1
  • Gene Type Coding gene
  • Location Chr5 : 8949706-8951123 : negative

Gene Family Information

  • ID HOM05D006435
  • #Genes/#Species 124/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G25640.1
  • uniprot F4JY73

Descriptions

  • Description Rhomboid-related intramembrane serine protease family protein
  • Computational description Rhomboid-related intramembrane serine protease family protein; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: rhomboid-like protein 11 (TAIR:AT5G25752.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004252
IEA
Gene Ontologyserine-type endopeptidase activity
GO:0004252
IEA
InterProserine-type endopeptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035952 Rhomboid-like superfamily
IPR022764 Peptidase S54, rhomboid domain
Mapman id Description
19.4.2.6 Protein homeostasis.proteolysis.serine-type peptidase activities.S54-class protease (RBL))