Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G25640 Arabidopsis thaliana HOM05D006435 ORTHO05D008262 9.1e-159 563.5 288 100.0
AL6G37520 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 7.8e-134 480.7 286 87.1
Carub.0006s2351 Capsella rubella HOM05D006435 ORTHO05D008262 4.9e-104 381.7 289 70.6
AL6G37530 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 4.2e-95 352.1 290 67.9
Sp2g21890 Schrenkiella parvula HOM05D006435 ORTHO05D008262 4.3e-92 342.0 293 65.5
CARHR187680 Cardamine hirsuta HOM05D006435 ORTHO05D008262 2.1e-91 339.7 290 66.6
Thhalv10004692m.g Eutrema salsugineum HOM05D006435 ORTHO05D008262 8.1e-91 337.8 293 64.5
Carub.0006s2947 Capsella rubella HOM05D006435 ORTHO05D008262 2.4e-90 336.3 292 66.4
BcaB07g29986 Brassica carinata HOM05D006435 ORTHO05D008262 1.2e-89 334.0 293 63.8
BcaC03g17897 Brassica carinata HOM05D006435 ORTHO05D008262 3.2e-87 325.9 293 62.1
C02p59390 Brassica napus HOM05D006435 ORTHO05D008262 3.2e-87 325.9 293 62.1
BraA02t08928Z Brassica rapa HOM05D006435 ORTHO05D008262 7.1e-87 324.7 293 61.8
Aa31LG11G4730 Aethionema arabicum HOM05D006435 ORTHO05D008262 1.6e-86 323.6 299 62.5
THA.LOC104815054 Tarenaya hassleriana HOM05D006435 ORTHO05D008262 2.5e-79 299.7 292 58.6
GSVIVG01035670001 Vitis vinifera HOM05D006435 ORTHO05D008262 5.0e-72 275.4 250 59.2
Cpa.g.sc78.80 Carica papaya HOM05D006435 ORTHO05D008262 6.5e-72 275.0 269 54.6
TWI32G0701 Tripterygium wilfordii HOM05D006435 ORTHO05D008262 4.2e-71 272.3 279 53.8
vmacro11085 Vaccinium macrocarpon HOM05D006435 ORTHO05D008262 5.5e-71 271.9 292 52.4
Ciclev10009372m.g Citrus clementina HOM05D006435 ORTHO05D008262 7.2e-71 271.6 220 60.9
Lalb_Chr22g0360991 Lupinus albus HOM05D006435 ORTHO05D008262 9.4e-71 271.2 220 62.3
Aqoxy7G01634 Aquilegia oxysepala HOM05D006435 ORTHO05D008262 2.7e-70 269.6 275 54.5
Manes.03G062800 Manihot esculenta HOM05D006435 ORTHO05D008262 2.7e-70 269.6 241 56.8
arahy.Tifrunner.gnm1.ann1.W16L9Q Arachis hypogaea HOM05D006435 ORTHO05D008262 6.1e-70 268.5 289 52.9
Potri.018G037300 Populus trichocarpa HOM05D006435 ORTHO05D008262 6.1e-70 268.5 246 58.1
QL12p026394 Quercus lobata HOM05D006435 ORTHO05D008262 6.1e-70 268.5 299 53.5
arahy.Tifrunner.gnm1.ann1.463B8J Arachis hypogaea HOM05D006435 ORTHO05D008262 7.9e-70 268.1 289 52.6
CSS0040195 Camellia sinensis var. sinensis HOM05D006435 ORTHO05D008262 7.9e-70 268.1 302 51.7
Glyma.17G190400 Glycine max HOM05D006435 ORTHO05D008262 7.9e-70 268.1 248 58.9
Actinidia31221 Actinidia chinensis HOM05D006435 ORTHO05D008262 1.4e-69 267.3 286 52.4
Atru.chr7.2160 Acer truncatum HOM05D006435 ORTHO05D008262 1.8e-69 266.9 218 61.9
CiPaw.07G207200 Carya illinoinensis HOM05D006435 ORTHO05D008262 1.8e-69 266.9 289 53.3
Eucgr.C01580 Eucalyptus grandis HOM05D006435 ORTHO05D008262 1.8e-69 266.9 278 55.0
Lj1g0009240 Lotus japonicus HOM05D006435 ORTHO05D008262 2.3e-69 266.5 223 61.4
Thecc.09G039800 Theobroma cacao HOM05D006435 ORTHO05D008262 2.3e-69 266.5 218 59.6
Cc00_g17690 Coffea canephora HOM05D006435 ORTHO05D008262 3.0e-69 266.2 265 54.3
VMungo0647G0379 Vigna mungo HOM05D006435 ORTHO05D008262 5.1e-69 265.4 227 60.8
Gohir.D05G050300 Gossypium hirsutum HOM05D006435 ORTHO05D008262 6.7e-69 265.0 220 60.5
Gohir.A05G048400 Gossypium hirsutum HOM05D006435 ORTHO05D008262 2.0e-68 263.5 220 60.0
Hma1.2p1_0140F.1_g063520 Hydrangea macrophylla HOM05D006435 ORTHO05D008262 2.6e-68 263.1 290 51.4
CANSAT80G2129 Cannabis sativa HOM05D006435 ORTHO05D008262 3.3e-68 262.7 255 54.5
Rhsim02G0182200 Rhododendron simsii HOM05D006435 ORTHO05D008262 3.3e-68 262.7 298 51.7
Duzib187G0700 Durio zibethinus HOM05D006435 ORTHO05D008262 9.7e-68 261.2 280 52.5
HanXRQChr02g0048091 Helianthus annuus HOM05D006435 ORTHO05D008262 9.7e-68 261.2 284 51.4
Oeu063249.1 Olea europaea HOM05D006435 ORTHO05D008262 9.7e-68 261.2 270 53.3
Lsat_1_v5_gn_6_10980 Lactuca sativa HOM05D006435 ORTHO05D008262 1.3e-67 260.8 229 56.3
AUR62009330 Chenopodium quinoa HOM05D006435 ORTHO05D008262 2.2e-67 260.0 260 55.0
Gorai.009G051800 Gossypium raimondii HOM05D006435 ORTHO05D008262 2.2e-67 260.0 219 58.9
Medtr1g008300 Medicago truncatula HOM05D006435 ORTHO05D008262 2.2e-67 260.0 229 59.0
DCAR_007705 Daucus carota HOM05D006435 ORTHO05D008262 2.8e-67 259.6 215 60.5
Sopen08g022120 Solanum pennellii HOM05D006435 ORTHO05D008262 3.7e-67 259.2 274 51.8
Solyc08g068270.3 Solanum lycopersicum HOM05D006435 ORTHO05D008262 6.3e-67 258.5 275 52.7
Lj8C603T5 Lonicera japonica HOM05D006435 ORTHO05D008262 1.1e-66 257.7 295 50.5
CDE05G2477 Ceratophyllum demersum HOM05D006435 ORTHO05D008262 1.4e-66 257.3 276 52.9
Hund19545 Selenicereus undatus HOM05D006435 ORTHO05D008262 1.4e-66 257.3 282 51.4
Cfa013344 Carpinus fangiana HOM05D006435 ORTHO05D008262 2.4e-66 256.5 292 51.7
AUR62023016 Chenopodium quinoa HOM05D006435 ORTHO05D008262 4.1e-66 255.8 228 58.8
EL10Ac2g04073 Beta vulgaris HOM05D006435 ORTHO05D008262 5.3e-66 255.4 213 62.4
MD15G1097700 Malus domestica HOM05D006435 ORTHO05D008262 5.3e-66 255.4 224 58.9
RcHm_v2.0_Chr6g0305751 Rosa chinensis HOM05D006435 ORTHO05D008262 6.9e-66 255.0 250 54.0
Ah.16g105260 Amaranthus hybridus HOM05D006435 ORTHO05D008262 9.1e-66 254.6 282 52.5
TPR.G12017 Trifolium pratense HOM05D006435 ORTHO05D008262 9.1e-66 254.6 222 60.4
MELO3C003582.2 Cucumis melo HOM05D006435 ORTHO05D008262 1.2e-65 254.2 271 53.9
ECA233G4084 Erigeron canadensis HOM05D006435 ORTHO05D008262 2.6e-65 253.1 257 52.9
Sed0025420 Sechium edule HOM05D006435 ORTHO05D008262 4.5e-65 252.3 213 60.1
PGSC0003DMG400014515 Solanum tuberosum HOM05D006435 ORTHO05D008262 5.9e-65 251.9 281 52.7
FAN27G2865 Fragaria x ananassa HOM05D006435 ORTHO05D008262 7.7e-65 251.5 212 58.0
CsaV3_3G047410 Cucumis sativus L. HOM05D006435 ORTHO05D008262 1.0e-64 251.1 213 61.5
MBI01_g28042_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 1.0e-64 251.1 281 50.9
Prupe.1G452600 Prunus persica HOM05D006435 ORTHO05D008262 1.0e-64 251.1 297 51.9
Phvul.001G078600 Phaseolus vulgaris HOM05D006435 ORTHO05D008262 1.3e-64 250.8 287 51.2
FvH4_2g36120 Fragaria vesca HOM05D006435 ORTHO05D008262 6.5e-64 248.4 294 49.0
Nn2g11721 Nelumbo nucifera HOM05D006435 ORTHO05D008262 6.5e-64 248.4 294 49.7
HPP92_001799 Vanilla planifolia HOM05D006435 ORTHO05D008262 8.5e-64 248.1 220 55.9
PSO782G5114 Papaver somniferum HOM05D006435 ORTHO05D008262 1.4e-63 247.3 227 56.8
SalBow4G2069 Salvia bowleyana HOM05D006435 ORTHO05D008262 1.4e-63 247.3 282 49.3
Dinv30253 Davidia involucrata HOM05D006435 ORTHO05D004219 1.9e-63 246.9 267 53.9
SGA_v2.0_scaffold280G46829 Striga asiatica HOM05D006435 ORTHO05D008262 2.5e-63 246.5 217 57.6
Migut.A00245 Erythranthe guttata HOM05D006435 ORTHO05D008262 4.2e-63 245.7 219 57.1
MSTRG.11716 Avicennia marina HOM05D006435 ORTHO05D008262 7.2e-63 245.0 251 53.8
PSO832G3386 Papaver somniferum HOM05D006435 ORTHO05D008262 7.2e-63 245.0 227 56.4
CAN.G797.1 Capsicum annuum HOM05D006435 ORTHO05D008262 4.7e-62 242.3 281 50.5
Nitab4.5_0003338g0080 Nicotiana tabacum HOM05D006435 ORTHO05D008262 4.7e-62 242.3 290 48.3
ATR0315G035 Amborella trichopoda HOM05D006435 ORTHO05D008262 1.1e-60 237.7 255 49.4
VMungo1215G1854 Vigna mungo HOM05D006435 ORTHO05D008262 2.0e-60 236.9 286 49.0
Sc09g0009090 Simmondsia chinensis HOM05D006435 ORTHO05D008262 1.3e-59 234.2 213 55.4
Zm00001eb350490 Zea mays HOM05D006435 ORTHO05D008262 1.3e-59 234.2 211 56.9
SEGI_13627 Sequoiadendron giganteum HOM05D006435 ORTHO05D008262 3.1e-58 229.6 219 53.0
PGR031G0325 Punica granatum HOM05D006435 ORTHO05D008262 7.0e-58 228.4 198 61.1
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 2.6e-57 226.5 247 48.6
FAN20G0337 Fragaria x ananassa HOM05D006435 ORTHO05D008262 4.5e-57 225.7 208 55.8
Os05g0220600 Oryza sativa ssp. japonica HOM05D006435 ORTHO05D008262 4.5e-57 225.7 228 51.8
COL.COLO4_18696 Corchorus olitorius HOM05D006435 ORTHO05D008262 2.2e-56 223.4 249 50.2
Haze_21849 Corylus avellana HOM05D006435 ORTHO05D008262 5.5e-55 218.8 231 53.2
Pp3c15_3110 Physcomitrium patens HOM05D006435 ORTHO05D008262 9.4e-55 218.0 274 48.2
Mapoly0109s0030 Marchantia polymorpha HOM05D006435 ORTHO05D008262 1.2e-54 217.6 238 50.0
Psat6g034280 Pisum sativum HOM05D006435 ORTHO05D008262 1.2e-54 217.6 175 62.9
AagrBONN_evm.TU.Sc2ySwM_117.700 Anthoceros agrestis HOM05D006435 ORTHO05D008262 4.7e-54 215.7 216 51.4
TAR624G0864 Trochodendron aralioides HOM05D006435 ORTHO05D008262 1.8e-53 213.8 162 67.9
SMO116G0425 Selaginella moellendorffii HOM05D006435 ORTHO05D008262 6.7e-53 211.8 256 44.9
Eucgr.L02138 Eucalyptus grandis HOM05D006435 ORTHO05D008262 9.1e-50 201.4 278 47.1
Solyc10g012245.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 1.5e-47 194.1 183 54.1
Ciclev10010273m.g Citrus clementina HOM05D006435 ORTHO05D008262 4.1e-42 176.0 167 55.7
A02p39610 Brassica napus HOM05D006435 ORTHO05D008262 5.5e-39 165.6 168 56.5
Nitab4.5_0000052g0140 Nicotiana tabacum HOM05D006435 ORTHO05D008262 6.8e-37 158.7 302 39.7
ClCG11G014010 Citrullus lanatus HOM05D006435 ORTHO05D008262 9.8e-36 154.8 133 63.2
Ca_12811_v3 Cicer arietinum L. HOM05D006435 ORTHO05D008262 1.4e-34 151.0 133 63.2
Peaxi162Scf00523g00529 Petunia axillaris HOM05D006435 ORTHO05D008262 7.0e-34 148.7 130 61.5
PSO782G5630 Papaver somniferum HOM05D006435 ORTHO05D008262 2.0e-33 147.1 204 39.7
Glyma.14G141900 Glycine max HOM05D006435 ORTHO05D008262 5.9e-33 145.6 100 72.0
MBI01_g28043_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 2.8e-30 136.7 217 40.1
Cre16.g664801 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D008262 5.2e-29 132.5 202 39.1
PRCOL_00005434 Prasinoderma coloniale HOM05D006435 ORTHO05D008262 3.2e-26 123.2 191 38.2
PSO782G2728 Papaver somniferum HOM05D006435 ORTHO05D008262 1.6e-25 120.9 205 38.5
Peaxi162Scf00523g00528 Petunia axillaris HOM05D006435 ORTHO05D008262 1.3e-24 117.9 154 46.1
FAN15G2703 Fragaria x ananassa HOM05D006435 ORTHO05D008262 1.6e-22 110.9 75 58.7
Sabra18G0038100 Salix brachista HOM05D006435 ORTHO05D008262 1.6e-22 110.9 113 54.9
Solyc10g012295.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 4.1e-18 96.3 91 57.1
PSO832G3154 Papaver somniferum HOM05D006435 ORTHO05D008262 2.3e-16 90.5 204 31.4
MBI01_g46977_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 1.3e-11 74.7 71 54.9
Cre11.g467648 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D143948 1.4e-10 71.2 99 35.4
MD08G1118500 Malus domestica HOM05D006435 ORTHO05D008262 2.7e-09 67.0 82 47.6
Cre12.g546200 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D146483 4.7e-06 56.2 135 27.4


User provided reference genes

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