Gene: AT5G23710

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G23710
  • Transcript Identifier AT5G23710.1
  • Gene Type Coding gene
  • Location Chr5 : 7996528-7997220 : negative

Gene Family Information

  • ID HOM05D003762
  • #Genes/#Species 183/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G23710.1
  • uniprot Q9LSZ5

Descriptions

  • Description DNA binding / DNA-directed RNA polymerase
  • Computational description DNA binding;DNA-directed RNA polymerases; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase Rpc34-like (InterPro:IPR016049), RNA polymerase Rpc34 (InterPro:IPR007832); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006383
IEA
GOA Databasetranscription by RNA polymerase III
GO:0006383
IEA
InterProtranscription by RNA polymerase III

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005666
IEA
GOA DatabaseRNA polymerase III complex
GO:0005666
IBA
Gene OntologyRNA polymerase III complex2
GO:0005666
IEA
InterProRNA polymerase III complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016049 RNA polymerase Rpc34-like
IPR007832 RNA polymerase Rpc34
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
15.4.5.2 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIe transcription factor complex.component RPC34