Gene: AT5G20250

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G20250
  • Transcript Identifier AT5G20250.2
  • Gene Type Coding gene
  • Location Chr5 : 6834207-6836635 : positive

Gene Family Information

  • ID HOM05D000527
  • #Genes/#Species 1034/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G20250.2
  • symbol DIN10
  • Alias RS6,raffinose synthase 6
  • full_name DARK INDUCIBLE 10
  • uniprot Q8RX87

Descriptions

  • Description Raffinose synthase family protein
  • Computational description DARK INDUCIBLE 10 (DIN10); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to karrikin, aging, response to light stimulus, response to cold, response to sucrose stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 2 (TAIR:AT3G57520.1); Has 568 Blast hits to 539 proteins in 163 species: Archae - 27; Bacteria - 128; Metazoa - 0; Fungi - 82; Plants - 321; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
IEP
Gene Ontologyresponse to oxidative stress1
GO:0009409
IEP
Gene Ontologyresponse to cold2
GO:0071456
HEP
Gene Ontologycellular response to hypoxia3
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0047274
IEA
Gene Ontologygalactinol-sucrose galactosyltransferase activity
GO:0003729
HDA
Gene OntologymRNA binding4
GO:0016757
IEA
GOA Databaseglycosyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0009507
HDA
ISM
Gene Ontologychloroplast5
GO:0009506
HDA
Gene Ontologyplasmodesma6
GO:0005829
HDA
Gene Ontologycytosol7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017853 Glycoside hydrolase superfamily
IPR008811 Glycosyl hydrolases 36
IPR013785 Aldolase-type TIM barrel
Mapman id Description
3.4.5 Carbohydrate metabolism.oligosaccharide metabolism.galactinol-sucrose galactosyltransferase