Gene: AT5G20170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G20170
  • Transcript Identifier AT5G20170.1
  • Gene Type Coding gene
  • Location Chr5 : 6807554-6810729 : negative

Gene Family Information

  • ID HOM05D005966
  • #Genes/#Species 132/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G20170.1
  • uniprot F4K460

Descriptions

  • Description RNA polymerase II transcription mediator
  • Computational description RNA polymerase II transcription mediators; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med17 (InterPro:IPR019313); Has 84 Blast hits to 82 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 6; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035196
IMP
Gene Ontologyproduction of miRNAs involved in gene silencing by miRNA1
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II2
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003712
IEA
GOA Databasetranscription coregulator activity
GO:0003712
IBA
Gene Ontologytranscription coregulator activity2
GO:0003712
IEA
InterProtranscription coregulator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0016592
IEA
GOA Databasemediator complex
GO:0016592
IDA
IBA
Gene Ontologymediator complex2 3
GO:0016592
IEA
InterPromediator complex
GO:0070847
IBA
Gene Ontologycore mediator complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019313 Mediator complex, subunit Med17
Mapman id Description
15.3.4.4.1.4 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.head module.component MED17