Gene: AT5G19820

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G19820
  • Transcript Identifier AT5G19820.1
  • Gene Type Coding gene
  • Location Chr5 : 6695731-6701247 : negative

Gene Family Information

  • ID HOM05D000846
  • #Genes/#Species 705/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G19820.1
  • symbol emb2734
  • full_name embryo defective 2734
  • uniprot Q93VS8

Descriptions

  • Description ARM repeat superfamily protein
  • Computational description embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006606
IEA
GOA Databaseprotein import into nucleus
GO:0006606
IMP
IBA
Gene Ontologyprotein import into nucleus1 2
GO:0006606
IEA
InterProprotein import into nucleus
GO:0015031
IEA
GOA Databaseprotein transport
GO:0009793
NAS
Gene Ontologyembryo development ending in seed dormancy
GO:0090069
IMP
Gene Ontologyregulation of ribosome biogenesis3
GO:0048229
IMP
Gene Ontologygametophyte development3
GO:2000636
IMP
Gene Ontologypositive regulation of primary miRNA processing2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0005515
IEA
InterProprotein binding
GO:0008139
IBA
Gene Ontologynuclear localization sequence binding1
GO:0061608
IBA
Gene Ontologynuclear import signal receptor activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
IBA
Gene Ontologycytoplasm1 3
GO:0005829
IDA
GOA Databasecytosol
GO:0005618
IDA
GOA Databasecell wall
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
IBA
Gene Ontologynucleus1 3
GO:0009536
HDA
Gene Ontologyplastid4
GO:0009505
HDA
Gene Ontologyplant-type cell wall5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040122 Importin beta family
IPR016024 Armadillo-type fold
IPR041389 Importin repeat 6
IPR034085 TOG domain
IPR041653 Importin repeat 4
IPR000357 HEAT repeat
IPR011989 Armadillo-like helical
Mapman id Description
23.5.1.2.4 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (IMB3)