Gene: AT5G19473
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G19473
- Transcript Identifier AT5G19473.1
- Gene Type Coding gene
- Location Chr5 : 6569268-6570680 : positive
Gene Family Information
- ID HOM05D002917
- #Genes/#Species 237/88
- Phylogenetic origin
- ID ORTHO05D002431
- #Genes/#Species 288/87
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G19473.1
- uniprot F4K158
Descriptions
- Description RPM1-interacting protein 4 (RIN4) family protein
- Computational description RPM1-interacting protein 4 (RIN4) family protein; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 77 Blast hits to 77 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005886 | ISO | PLAZA Tree-based Orthology | plasma membrane | AT5G64850 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008700 | RIN4, pathogenic type III effector avirulence factor Avr cleavage site |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |