Gene: AT5G18420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G18420
  • Transcript Identifier AT5G18420.1
  • Gene Type Coding gene
  • Location Chr5 : 6105638-6109337 : negative

Gene Family Information

  • ID HOM05D004012
  • #Genes/#Species 174/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G18420.1
  • uniprot B4F7N8

Descriptions

  • Description CCR4-NOT transcription complex subunit
  • Computational description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017148
IBA
Gene Ontologynegative regulation of translation1
GO:0006402
IBA
Gene OntologymRNA catabolic process1
GO:0008150
ND
GOA Databasebiological_process
GO:0031047
IEA
GOA Databasegene silencing by RNA

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030014
IBA
IEA
Gene OntologyCCR4-NOT complex1
GO:0030014
IEA
InterProCCR4-NOT complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019312 CCR4-NOT transcription complex subunit 11
Mapman id Description
35.1 not assigned.annotated