Gene: AT5G17880

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G17880
  • Transcript Identifier AT5G17880.2
  • Gene Type Coding gene
  • Location Chr5 : 5909046-5913096 : negative

Gene Family Information

  • ID HOM05D000005
  • #Genes/#Species 11550/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G17880.2
  • symbol CSA1
  • full_name constitutive shade-avoidance1
  • uniprot F4KIF3

Descriptions

  • Description disease resistance protein (TIR-NBS-LRR class)
  • Computational description constitutive shade-avoidance1 (CSA1); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: response to light stimulus, defense response to bacterium, response to red light, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G51570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010114
IMP
Gene Ontologyresponse to red light1
GO:0006952
IEA
Gene Ontologydefense response
GO:0006952
IEA
InterProdefense response
GO:0007165
IEA
Gene Ontologysignal transduction
GO:0007165
IEA
InterProsignal transduction
GO:0042742
IMP
Gene Ontologydefense response to bacterium1
GO:0009416
IMP
Gene Ontologyresponse to light stimulus1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043531
IEA
Gene OntologyADP binding
GO:0043531
IEA
InterProADP binding
GO:0003953
IEA
Gene OntologyNAD+ nucleosidase activity
GO:0003953
IEA
InterProNAD+ nucleosidase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0061809
IEA
Gene OntologyNAD+ nucleotidase, cyclic ADP-ribose generating
GO:0050135
IEA
Gene OntologyNAD(P)+ nucleosidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR032675 Leucine-rich repeat domain superfamily
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily
IPR044974 Disease resistance protein, plants
IPR011713 Leucine-rich repeat 3
IPR002182 NB-ARC
Mapman id Description
35.1 not assigned.annotated