Gene: AT5G17490
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G17490
- Transcript Identifier AT5G17490.1
- Gene Type Coding gene
- Location Chr5 : 5764316-5765887 : negative
Gene Family Information
- ID HOM05D000063
- #Genes/#Species 3996/96
- Phylogenetic origin
- ID ORTHO05D001671
- #Genes/#Species 371/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G17490.1
- symbol RGL3
- Alias AtRGL3
- uniprot Q9LF53
Descriptions
- Description RGA-like protein 3
- Computational description RGA-like protein 3 (RGL3); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:2000033 | IBA | Gene Ontology | regulation of seed dormancy process | 1 |
| GO:0009740 | IEA | GOA Database | gibberellic acid mediated signaling pathway | |
| GO:0009740 | TAS | Gene Ontology | gibberellic acid mediated signaling pathway | 2 |
| GO:0042538 | IBA | Gene Ontology | hyperosmotic salinity response | 1 |
| GO:0009737 | IBA | Gene Ontology | response to abscisic acid | 1 |
| GO:0009867 | IBA | Gene Ontology | jasmonic acid mediated signaling pathway | 1 |
| GO:0009863 | IBA | Gene Ontology | salicylic acid mediated signaling pathway | 1 |
| GO:0006355 | IBA | Gene Ontology | regulation of transcription, DNA-templated | 1 |
| GO:0010187 | IBA | Gene Ontology | negative regulation of seed germination | 1 |
| GO:2000377 | IBA | Gene Ontology | regulation of reactive oxygen species metabolic process | 1 |
| GO:0009938 | IBA | Gene Ontology | negative regulation of gibberellic acid mediated signaling pathway | 1 |
| GO:0009723 | IBA | Gene Ontology | response to ethylene | 1 |
| GO:0009739 | IEP ISS | Gene Ontology | response to gibberellin | 2 3 |
| GO:2000693 | IGI | Gene Ontology | positive regulation of seed maturation | |
| GO:0010431 | IMP | Gene Ontology | seed maturation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS, IBA TAS | Gene Ontology | DNA-binding transcription factor activity | 1 2 4 |
| GO:0043565 | IBA | Gene Ontology | sequence-specific DNA binding | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA TAS | Gene Ontology | nucleus | 1 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 11.6.2.2 | Phytohormone action.gibberellin.perception and signal transduction.signal transducer (DELLA) |
| 15.5.12 | RNA biosynthesis.transcriptional regulation.transcription factor (GRAS) |
| 26.6.2.1 | External stimuli response.salinity.gibberellin-abscisic acid signalling pathways crosstalk.transcription factor (DELLA) |