Gene: AT5G13990
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G13990
- Transcript Identifier AT5G13990.1
- Gene Type Coding gene
- Location Chr5 : 4514680-4516767 : negative
Gene Family Information
- ID HOM05D000139
- #Genes/#Species 2613/99
- Phylogenetic origin
- ID ORTHO05D000103
- #Genes/#Species 2064/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G13990.1
- symbol EXO70C2
- Alias ATEXO70C2,exocyst subunit exo70 family protein C2
- uniprot Q9FFX6
Descriptions
- Description exocyst subunit exo70 family protein C2
- Computational description exocyst subunit exo70 family protein C2 (EXO70C2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C1 (TAIR:AT5G13150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080092 | IMP | Gene Ontology | regulation of pollen tube growth | 1 |
| GO:0006887 | IEA | GOA Database | exocytosis | |
| GO:0006887 | IBA | Gene Ontology | exocytosis | 2 |
| GO:0006887 | IEA | InterPro | exocytosis | |
| GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 3 |
| GO:0005829 | IDA | Gene Ontology | cytosol | 3 |
| GO:0005886 | IDA | Gene Ontology | plasma membrane | 1 |
| GO:0090406 | IDA | Gene Ontology | pollen tube | 1 |
| GO:0000145 | IEA | GOA Database | exocyst | |
| GO:0000145 | IBA | Gene Ontology | exocyst | 2 |
| GO:0000145 | IEA | InterPro | exocyst |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.5.1.1 | Vesicle trafficking.exocytic trafficking.Exocyst complex.component EXO70 |