Gene: AT5G13770

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G13770
  • Transcript Identifier AT5G13770.1
  • Gene Type Coding gene
  • Location Chr5 : 4445461-4447290 : positive

Gene Family Information

  • ID HOM05D007280
  • #Genes/#Species 107/82
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G13770.1
  • uniprot Q66GP4

Descriptions

  • Description Pentatricopeptide repeat (PPR-like) superfamily protein
  • Computational description Pentatricopeptide repeat (PPR-like) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT5G42310.1); Has 28118 Blast hits to 10756 proteins in 260 species: Archae - 2; Bacteria - 14; Metazoa - 159; Fungi - 283; Plants - 26809; Viruses - 0; Other Eukaryotes - 851 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
IMP
Gene Ontologychloroplast organization1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding2
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
35.1 not assigned.annotated