Gene: AT5G12200

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G12200
  • Transcript Identifier AT5G12200.1
  • Gene Type Coding gene
  • Location Chr5 : 3941700-3944727 : negative

Gene Family Information

  • ID HOM05D004351
  • #Genes/#Species 164/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G12200.1
  • symbol PYD2
  • uniprot Q9FMP3

Descriptions

  • Description pyrimidine 2
  • Computational description pyrimidine 2 (PYD2); CONTAINS InterPro DOMAIN/s: D-hydantoinase (InterPro:IPR011778), Amidohydrolase 1 (InterPro:IPR006680), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: allantoinase (TAIR:AT4G04955.1); Has 11476 Blast hits to 11454 proteins in 2253 species: Archae - 299; Bacteria - 6727; Metazoa - 670; Fungi - 189; Plants - 91; Viruses - 0; Other Eukaryotes - 3500 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006208
IBA
Gene Ontologypyrimidine nucleobase catabolic process1
GO:0043562
IEP
Gene Ontologycellular response to nitrogen levels2
GO:0006212
IMP
Gene Ontologyuracil catabolic process2
GO:0019483
IEA
Gene Ontologybeta-alanine biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004157
IEA
GOA Databasedihydropyrimidinase activity
GO:0004157
IGI
IBA
Gene Ontologydihydropyrimidinase activity1 3
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IEA
InterProhydrolase activity
GO:0016810
IEA
GOA Databasehydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016810
IEA
InterProhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005783
IDA
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
HDA
Gene Ontologyendoplasmic reticulum4
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus5
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009536
HDA
Gene Ontologyplastid6
GO:0012505
IDA
Gene Ontologyendomembrane system2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011778 Hydantoinase/dihydropyrimidinase
IPR011059 Metal-dependent hydrolase, composite domain superfamily
IPR032466 Metal-dependent hydrolase
IPR006680 Amidohydrolase-related
Mapman id Description
6.2.4.4 Nucleotide metabolism.pyrimidines.catabolism.dihydopyrimidine aminohydrolase (PYD2)