Gene: AT5G12130

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G12130
  • Transcript Identifier AT5G12130.1
  • Gene Type Coding gene
  • Location Chr5 : 3919613-3922154 : positive

Gene Family Information

  • ID HOM05D005749
  • #Genes/#Species 135/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G12130.1
  • symbol PDE149
  • Alias ATTERC,TELLURITE RESISTANCE C
  • full_name PIGMENT DEFECTIVE 149
  • uniprot F4JZG9

Descriptions

  • Description integral membrane TerC family protein
  • Computational description PIGMENT DEFECTIVE 149 (PDE149); CONTAINS InterPro DOMAIN/s: Integral membrane protein TerC (InterPro:IPR005496), Integral membrane protein TerC, riboswitch-linked (InterPro:IPR022369); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010027
IMP
Gene Ontologythylakoid membrane organization1
GO:0090351
IMP
Gene Ontologyseedling development2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISM
Gene Ontologyplasma membrane
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009535
IDA
Gene Ontologychloroplast thylakoid membrane1
GO:0009534
IDA
Gene Ontologychloroplast thylakoid2
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0009579
IEA
GOA Databasethylakoid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005496 Integral membrane protein TerC
IPR022369 Integral membrane protein TerC, riboswitch-linked
Mapman id Description
1.1.1.3.17 Photosynthesis.photophosphorylation.photosystem II.assembly.assembly factor (TerC)