Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 3.7e-208 728.0 385 100.0
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 5.4e-191 671.0 390 92.1
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 2.3e-189 665.6 389 92.8
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 3.2e-183 645.2 389 87.7
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 8.7e-181 637.1 390 86.9
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 3.1e-170 602.1 392 82.9
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 3.4e-169 598.6 392 82.7
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 1.0e-168 597.0 402 80.8
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 6.5e-168 594.3 395 81.3
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 6.5e-168 594.3 395 81.3
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 4.6e-166 588.2 396 82.1
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 1.9e-164 582.8 393 81.2
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 1.3e-160 570.1 385 79.0
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 3.0e-157 558.9 394 80.5
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 5.7e-156 554.7 394 79.7
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 2.2e-147 526.2 310 92.3
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 7.2e-143 511.1 395 74.2
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 3.8e-128 462.2 383 68.1
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 3.8e-128 462.2 386 67.6
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 4.2e-127 458.8 385 68.6
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 2.1e-126 456.4 385 66.2
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 1.4e-125 453.8 338 73.1
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 2.3e-125 453.0 380 66.8
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 1.2e-124 450.7 329 73.3
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 1.5e-124 450.3 385 66.5
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 3.4e-124 449.1 385 67.0
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 3.4e-124 449.1 381 66.9
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 5.7e-124 448.4 381 66.9
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 1.3e-123 447.2 384 66.7
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 3.7e-123 445.7 388 64.7
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 3.7e-123 445.7 385 66.5
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 4.8e-123 445.3 381 66.4
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 1.8e-122 443.4 381 67.2
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 2.4e-122 443.0 384 66.4
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 3.1e-122 442.6 389 64.5
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 4.1e-122 442.2 383 64.5
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 4.1e-122 442.2 384 66.9
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 1.6e-121 440.3 389 62.7
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.3e-120 437.2 322 73.3
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 1.3e-120 437.2 389 62.2
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 2.9e-120 436.0 352 68.5
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.0e-120 435.3 384 66.1
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 6.5e-120 434.9 381 64.3
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 1.5e-119 433.7 404 62.6
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 1.5e-119 433.7 386 65.3
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.5e-119 433.7 386 65.3
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 1.9e-119 433.3 274 82.1
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 2.5e-119 433.0 346 69.1
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.2e-119 432.6 384 65.6
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 5.5e-119 431.8 383 64.5
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 5.5e-119 431.8 274 81.8
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 9.5e-119 431.0 274 81.8
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.6e-118 430.3 310 74.2
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 2.1e-118 429.9 349 68.5
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 4.7e-118 428.7 383 63.2
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 4.7e-118 428.7 381 63.3
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 2.3e-117 426.4 342 68.4
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 5.2e-117 425.2 382 63.4
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 8.8e-117 424.5 384 62.5
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 2.6e-116 422.9 385 62.9
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.7e-115 420.2 381 62.7
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 2.2e-115 419.9 281 77.9
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.3e-115 418.3 293 77.5
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 6.3e-115 418.3 338 68.3
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 3.1e-114 416.0 338 67.2
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 7.0e-114 414.8 381 62.5
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 2.7e-113 412.9 387 62.5
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 2.7e-113 412.9 269 78.4
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 3.5e-113 412.5 272 79.4
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 7.8e-113 411.4 360 65.0
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.0e-112 411.0 312 70.8
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 1.3e-112 410.6 272 77.9
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 2.9e-112 409.5 404 61.1
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 1.1e-111 407.5 341 66.3
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.5e-111 406.4 258 80.2
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 3.3e-111 406.0 270 77.4
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 4.3e-111 405.6 345 64.6
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 4.3e-111 405.6 372 62.6
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 6.8e-109 398.3 388 61.3
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 2.0e-105 386.7 335 67.5
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 1.7e-104 383.6 360 61.4
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 8.6e-104 381.3 376 59.3
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 1.2e-102 377.5 269 71.7
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 2.1e-102 376.7 320 64.7
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 8.0e-102 374.8 319 66.8
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 3.1e-101 372.9 269 70.6
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.5e-100 370.5 329 61.4
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 6.4e-99 365.2 271 70.5
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 8.3e-99 364.8 316 64.2
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 1.1e-98 364.4 236 80.5
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 9.2e-98 361.3 343 60.1
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 8.6e-96 354.8 474 48.3
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 1.1e-95 354.4 375 57.9
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.3e-95 352.8 414 52.4
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 5.6e-95 352.1 479 47.4
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 5.6e-95 352.1 271 67.2
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 1.1e-93 347.8 300 65.3
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 6.8e-93 345.1 401 54.6
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 1.5e-92 344.0 272 64.3
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 1.5e-92 344.0 305 61.3
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 1.4e-90 337.4 259 73.0
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.6e-88 328.6 205 82.9
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.4e-85 320.1 237 70.9
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 7.6e-84 315.1 245 68.6
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 4.3e-79 299.3 325 57.8
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 1.6e-78 297.4 423 48.7
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 1.7e-75 287.3 176 85.8
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.9e-74 283.9 397 48.4
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 2.4e-74 283.5 263 58.2
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 2.4e-74 283.5 263 58.2
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 7.8e-73 278.5 265 59.6
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 1.3e-72 277.7 263 60.5
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 8.1e-70 268.5 264 56.4
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 6.4e-67 258.8 188 69.7
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 3.5e-65 253.1 273 52.7
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 1.3e-62 244.6 157 78.3
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.2e-60 238.0 263 50.2
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.4e-53 214.5 129 84.5
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 5.8e-52 209.1 130 80.8
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 6.0e-49 199.1 138 74.6
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 8.2e-46 188.7 114 88.6
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.1e-39 168.3 105 79.0
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 2.5e-39 167.2 251 39.0
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-26 124.4 187 38.0
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 2.3e-24 117.5 180 40.6
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 1.1e-23 115.2 82 74.4
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 1.1e-21 108.6 90 66.7
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.4e-13 81.6 149 37.6
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 2.0e-12 77.8 48 87.5
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 1.3e-11 75.1 38 94.7
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 1.1e-10 72.0 278 26.3
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 4.0e-08 63.5 36 86.1
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 2.0e-07 61.2 55 58.2


User provided reference genes

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