Gene: AT5G11870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G11870
  • Transcript Identifier AT5G11870.2
  • Gene Type Coding gene
  • Location Chr5 : 3825720-3827363 : positive

Gene Family Information

  • ID HOM05D003275
  • #Genes/#Species 209/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G11870.2
  • uniprot Q9LYI6

Descriptions

  • Description Alkaline phytoceramidase (aPHC)
  • Computational description Alkaline phytoceramidase (aPHC); FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: ceramide metabolic process; LOCATED IN: integral to membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ceramidase (InterPro:IPR008901); BEST Arabidopsis thaliana protein match is: senescence associated gene 18 (TAIR:AT1G71190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Computational description Alkaline phytoceramidase (aPHC); FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: ceramide metabolic process; LOCATED IN: integral to membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ceramidase (InterPro:IPR008901); BEST Arabidopsis thaliana protein match is: senescence associated gene 18 (TAIR:AT1G71190.1).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
Mapman id Description
35.1 not assigned.annotated