Gene: AT5G11620

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G11620
  • Transcript Identifier AT5G11620.1
  • Gene Type Coding gene
  • Location Chr5 : 3739076-3740127 : negative

Gene Family Information

  • ID HOM05D005944
  • #Genes/#Species 132/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G11620.1
  • uniprot Q9LYG8

Descriptions

  • Description SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-like protein
  • Computational description SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, SWIM-type (InterPro:IPR007527), Zinc finger, RING-type (InterPro:IPR001841); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016310
IEA
GOA Databasephosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0061630
IEA
Gene Ontologyubiquitin protein ligase activity
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0016301
IEA
GOA Databasekinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039903 E3 ubiquitin-protein ligase Zswim2
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR007527 Zinc finger, SWIM-type
Mapman id Description
35.1 not assigned.annotated