Gene: AT5G11470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G11470
  • Transcript Identifier AT5G11470.2
  • Gene Type Coding gene
  • Location Chr5 : 3663216-3667041 : negative

Gene Family Information

  • ID HOM05D002580
  • #Genes/#Species 264/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G11470.2
  • Alias ASI1,ANTI-SILENCING 1,IBM2,Increase in Bonsai Methylation 2,SG1,SHOOT GROWTH 1
  • uniprot Q9LYE3

Descriptions

  • Description bromo-adjacent homology (BAH) domain-containing protein
  • Computational description bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT3G15605.4); Has 602 Blast hits to 478 proteins in 106 species: Archae - 0; Bacteria - 17; Metazoa - 295; Fungi - 38; Plants - 91; Viruses - 4; Other Eukaryotes - 157 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006325
IEA
GOA Databasechromatin organization
GO:0031936
IDA
IBA
Gene Ontologynegative regulation of chromatin silencing1 2
GO:0051570
IGI
IBA
Gene Ontologyregulation of histone H3-K9 methylation1 3
GO:1905642
IMP
IBA
Gene Ontologynegative regulation of DNA methylation1 4
GO:0044030
IMP
Gene Ontologyregulation of DNA methylation3
GO:0031060
IDA, IMP
Gene Ontologyregulation of histone methylation3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003682
IEA
Gene Ontologychromatin binding
GO:0003682
IEA
InterProchromatin binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IDA
IBA
Gene OntologyRNA binding1 4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032991
IPI
Gene Ontologyprotein-containing complex5
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043151 Bromo adjacent homology (BAH) domain superfamily
IPR001025 Bromo adjacent homology (BAH) domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
12.5.2.5.1 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.ASI1-AIPP1-EDM2 chromatin silencing regulator complex.component ASI1/IBM2