Gene: AT5G11240

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G11240
  • Transcript Identifier AT5G11240.1
  • Gene Type Coding gene
  • Location Chr5 : 3582949-3586782 : positive

Gene Family Information

  • ID HOM05D002282
  • #Genes/#Species 296/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G11240.1
  • uniprot B5X503

Descriptions

  • Description transducin family protein / WD-40 repeat family protein
  • Computational description transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp12 (InterPro:IPR007148), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 8385 Blast hits to 5100 proteins in 391 species: Archae - 41; Bacteria - 3255; Metazoa - 1724; Fungi - 1723; Plants - 553; Viruses - 0; Other Eukaryotes - 1089 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IPI
Gene OntologyrRNA processing1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISM
Gene Ontologynucleus2
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IDA
Gene Ontologynucleolus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
IPR007148 Small-subunit processome, Utp12
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
35.1 not assigned.annotated