Gene: AT5G10340

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G10340
  • Transcript Identifier AT5G10340.1
  • Gene Type Coding gene
  • Location Chr5 : 3253122-3255045 : positive

Gene Family Information

  • ID HOM05D001738
  • #Genes/#Species 373/13
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G10340.1
  • uniprot Q9LX89

Descriptions

  • Description F-box family protein
  • Computational description F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IBA
Gene Ontologyregulation of transcription, DNA-templated1
GO:0050821
ISO
PLAZA Integrative Orthologyprotein stabilization AT1G12490
GO:0009789
ISO
PLAZA Integrative Orthologypositive regulation of abscisic acid-activated signaling pathway AT1G12490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IBA
Gene OntologyDNA-binding transcription factor activity1
GO:0043565
IBA
Gene Ontologysequence-specific DNA binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017451 F-box associated interaction domain
IPR011043 Galactose oxidase/kelch, beta-propeller
IPR006527 F-box associated domain, type 1
IPR036047 F-box-like domain superfamily
Mapman id Description
35.1 not assigned.annotated