Gene: AT5G08170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G08170
  • Transcript Identifier AT5G08170.1
  • Gene Type Coding gene
  • Location Chr5 : 2628663-2631047 : negative

Gene Family Information

  • ID HOM05D004692
  • #Genes/#Species 156/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G08170.1
  • symbol EMB1873
  • Alias ATAIH,AGMATINE IMINOHYDROLASE
  • full_name EMBRYO DEFECTIVE 1873
  • uniprot Q8GWW7

Descriptions

  • Description porphyromonas-type peptidyl-arginine deiminase family protein
  • Computational description EMBRYO DEFECTIVE 1873 (EMB1873); CONTAINS InterPro DOMAIN/s: Agmatine deiminase (InterPro:IPR017754), Peptidyl-arginine deiminase, Porphyromonas-type (InterPro:IPR007466); Has 2547 Blast hits to 2545 proteins in 784 species: Archae - 10; Bacteria - 1723; Metazoa - 8; Fungi - 32; Plants - 53; Viruses - 9; Other Eukaryotes - 712 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009446
IEA
Gene Ontologyputrescine biosynthetic process
GO:0009446
IEA
InterProputrescine biosynthetic process
GO:0009793
NAS
Gene Ontologyembryo development ending in seed dormancy
GO:0033388
IEA
Gene Ontologyputrescine biosynthetic process from arginine
GO:0006596
IEA
GOA Databasepolyamine biosynthetic process
GO:0006596
IDA
Gene Ontologypolyamine biosynthetic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004668
IEA
Gene Ontologyprotein-arginine deiminase activity
GO:0004668
IEA
InterProprotein-arginine deiminase activity
GO:0047632
IDA
IEA
Gene Ontologyagmatine deiminase activity1
GO:0047632
IEA
InterProagmatine deiminase activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type
IPR017754 Agmatine deiminase
Mapman id Description
8.1.1.2 Polyamine metabolism.putrescine biosynthesis.plastidial/nuclear pathway.agmatine iminohydrolase