Gene: AT5G06980
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G06980
- Transcript Identifier AT5G06980.1
- Gene Type Coding gene
- Location Chr5 : 2167799-2169133 : positive
Gene Family Information
- ID HOM05D008873
- #Genes/#Species 40/12
- Phylogenetic origin
- ID ORTHO05D005982
- #Genes/#Species 149/78
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G06980.1
- Alias LNK4,night light-inducible and clock-regulated 4
- uniprot Q9FL48
Descriptions
- Description hypothetical protein
- Computational description unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0007623 | IGI IEA | Gene Ontology | circadian rhythm | 1 |
| GO:0007623 | IEA | InterPro | circadian rhythm | |
| GO:0080167 | IEP | GOA Database | response to karrikin |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039928 | LNK family |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |